RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PRRC2BQ5JSZ5 2229 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-210ENST00000490099 UNC80Q8N2C7 3258 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 IGLV3-22A0A075B6J6 115 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 EPOPA6NHQ4 379 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 KIF28PB7ZC32 967 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 ADAMTS3O15072 1205 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 EDIL3O43854 480 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 LPXNO60711 386 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 CHRNA1P02708 482 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 IFNAR1P17181 557 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 PSMA5P28066 241 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 METAP2P50579 478 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 ADCY7P51828 1080 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 DEFB103AP81534 67 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 HTRA4P83105 476 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 ITGB3BPQ13352 177 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 MCTP2Q6DN12 878 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 PLPPR4Q7Z2D5 763 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 RAD9AQ99638 391 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 JPH1Q9HDC5 661 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 TMEM260Q9NX78 707 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 NCOR1O75376 2440 aa11.11□□□□□ -0.63
TMEM39A-210ENST00000490099 DOCK5Q9H7D0 1870 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 TRANK1O15050 2925 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 PTPRSQ13332 1948 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 LCHNA4D1U4 455 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 FAM86B1E9PN63 330 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 TLL1O43897 1013 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 CCNE2O96020 404 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 FAM86B2P0C5J1 330 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 CIITAP33076 1130 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 KCNJ6P48051 423 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 ACTR2P61160 394 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 MGAT3Q09327 533 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 RUFY3Q7L099 469 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 TMCO2Q7Z6W1 182 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 ATXN2LQ8WWM7 1075 aaKnown RBP11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 SLC9A2Q9UBY0 812 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 EYSQ5T1H1 3165 aa11.1□□□□□ -0.63
TMEM39A-210ENST00000490099 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 RRN3P2A6NIE6 340 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 INSRRP14616 1297 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 PSEN1P49768 467 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 SLC26A2P50443 739 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 ERVK-21P61565 698 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 FGD1P98174 961 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 SP4Q02446 784 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 GRIK4Q16099 956 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 ABHD15Q6UXT9 468 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 RUFY4Q6ZNE9 571 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 SEPT8Q92599 483 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 TOP1MTQ969P6 601 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 IL17RAQ96F46 866 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 PRDM6Q9NQX0 595 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
TMEM39A-210ENST00000490099 RFXAPO00287 272 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 GNA11P29992 359 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 TIE1P35590 1138 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 APBB2Q92870 758 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 GLG1Q92896 1179 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 PHKBQ93100 1093 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 LENG9Q96B70 501 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 SDF4Q9BRK5 362 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 SUGCTQ9HAC7 445 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 C6orf50Q9HD87 102 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 TUBE1Q9UJT0 475 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 SQORQ9Y6N5 450 aa11.08□□□□□ -0.64
TMEM39A-210ENST00000490099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 M0R2N6 131 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 IPO5O00410 1097 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 AMHP03971 560 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 CTSHP09668 335 aa11.07□□□□□ -0.64
TMEM39A-210ENST00000490099 ATP4AP20648 1035 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms