RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 BTBD8Q5XKL5 378 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 Q6ZUG5 572 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 GGNQ86UU5 652 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 STPG3Q8N7X2 389 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 C1QTNF3Q9BXJ4 246 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 CATSPERZQ9NTU4 200 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 ZNF536O15090 1300 aa5.92□□□□□ -1.46
HMGN1-218ENST00000490032 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-218ENST00000490032 GSTA4O15217 222 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 EFCAB14O75071 495 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 GLRBP48167 497 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 LACTBP83111 547 aaPredicted RBP5.91□□□□□ -1.46
HMGN1-218ENST00000490032 CRY1Q16526 586 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 FAM47CQ5HY64 1035 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 GLB1LQ6UWU2 654 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 OSTM1Q86WC4 334 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 LOXL4Q96JB6 756 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 SRPK1Q96SB4 655 aaKnown RBP5.91□□□□□ -1.46
HMGN1-218ENST00000490032 DNAJC7Q99615 494 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 KATNBL1Q9H079 304 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 SLC52A2Q9HAB3 445 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 ATP23Q9Y6H3 246 aa5.91□□□□□ -1.46
HMGN1-218ENST00000490032 CCDC163A0A0D9SF12 145 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.9□□□□□ -1.46
HMGN1-218ENST00000490032 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 KCNQ2O43526 872 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 CLASP2O75122 1294 aaKnown RBP5.9□□□□□ -1.46
HMGN1-218ENST00000490032 SRGAP2CP0DJJ0 459 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 JAM2P57087 298 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 ST5P78524 1137 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 CPZQ66K79 652 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 ARHGEF18Q6ZSZ5 1173 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 LIMS2Q7Z4I7 341 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 PTRH1Q86Y79 214 aaKnown RBP5.9□□□□□ -1.46
HMGN1-218ENST00000490032 REXO1L1PQ8IX06 675 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
HMGN1-218ENST00000490032 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 SMURF1Q9HCE7 757 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 SLC39A2Q9NP94 309 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 RIC8BQ9NVN3 520 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 MYRFQ9Y2G1 1151 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 ZDHHC9Q9Y397 364 aa5.9□□□□□ -1.46
HMGN1-218ENST00000490032 C1QTNF3-AMACRE9PGA6 284 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 H0Y858 1186 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 B4GALT4O60513 344 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 C4BPAP04003 597 aaKnown RBP5.89□□□□□ -1.47
HMGN1-218ENST00000490032 CSF2RBP32927 897 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 HERVK_113P62684 666 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 ZXDCQ2QGD7 858 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-218ENST00000490032 RALYLQ86SE5 291 aaKnown RBP5.89□□□□□ -1.47
HMGN1-218ENST00000490032 ZC3H7AQ8IWR0 971 aaKnown RBP5.89□□□□□ -1.47
HMGN1-218ENST00000490032 ZSWIM2Q8NEG5 633 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 DNERQ8NFT8 737 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 SLC7A14Q8TBB6 771 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 C8orf49Q96NF6 230 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 TACO1Q9BSH4 297 aaKnown RBP5.89□□□□□ -1.47
HMGN1-218ENST00000490032 NDOR1Q9UHB4 597 aa5.89□□□□□ -1.47
HMGN1-218ENST00000490032 NPEPPSL1A6NEC2 478 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 GPR42O15529 346 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 ZNF20P17024 532 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 AOAHP28039 575 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 SLFN13Q68D06 897 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 DPP8Q6V1X1 898 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-218ENST00000490032 SCLYQ96I15 445 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 GPR20Q99678 358 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 MRPL4Q9BYD3 311 aaKnown RBP5.88□□□□□ -1.47
HMGN1-218ENST00000490032 CELF4Q9BZC1 486 aaKnown RBP5.88□□□□□ -1.47
HMGN1-218ENST00000490032 MEGF9Q9H1U4 602 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 BTBD7Q9P203 1132 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 SLC4A7Q9Y6M7 1214 aa5.88□□□□□ -1.47
HMGN1-218ENST00000490032 CUTAO60888 179 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 CNOT4O95628 575 aaKnown RBP5.87□□□□□ -1.47
HMGN1-218ENST00000490032 INSRRP14616 1297 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 KRT15P19012 456 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 POLD1P28340 1107 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 DNM2P50570 870 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 C2orf27AQ580R0 203 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 CIR1Q86X95 450 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-218ENST00000490032 NOSTRINQ8IVI9 506 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 PMFBP1Q8TBY8 1022 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 MAGEB10Q96LZ2 347 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-218ENST00000490032 SEC61A2Q9H9S3 476 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 CD248Q9HCU0 757 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 ARHGAP28Q9P2N2 729 aa5.87□□□□□ -1.47
HMGN1-218ENST00000490032 RASGRP1O95267 797 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 KCNA6P17658 529 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 PTGS1P23219 599 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 TOP3AQ13472 1001 aaPredicted RBP5.86□□□□□ -1.47
HMGN1-218ENST00000490032 ICAM4Q14773 271 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 SEC23AQ15436 765 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 LILRB2Q8N423 598 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 CHST13Q8NET6 341 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 DVL3Q92997 716 aaPredicted RBP5.86□□□□□ -1.47
HMGN1-218ENST00000490032 PTPN18Q99952 460 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 OSBPL2Q9H1P3 480 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 INCENPQ9NQS7 918 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 GALNT8Q9NY28 637 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 SFMBT1Q9UHJ3 866 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms