RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 NBNO60934 754 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 ATP9AO75110 1047 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 FOSP01100 380 aaPredicted RBP13.35□□□□□ -0.27
GGPS1-207ENST00000489692 CDC27P30260 824 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
GGPS1-207ENST00000489692 SCRN1Q12765 414 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 SERINC5Q86VE9 423 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 ZNF713Q8N859 430 aaPredicted RBP13.35□□□□□ -0.27
GGPS1-207ENST00000489692 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
GGPS1-207ENST00000489692 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 ANO3Q9BYT9 981 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 GLT8D2Q9H1C3 349 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
GGPS1-207ENST00000489692 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 TMEM260Q9NX78 707 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 BARHL2Q9NY43 387 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 TELO2Q9Y4R8 837 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 UBIAD1Q9Y5Z9 338 aa13.35□□□□□ -0.27
GGPS1-207ENST00000489692 ABHD14A-ACY1A0A1B0GW23 586 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 GADD45BO75293 160 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 KCNA2P16389 499 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 RCAN1P53805 252 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 WDR5P61964 334 aaKnown RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 IGBP1P78318 339 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 RBL2Q08999 1139 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 PPFIA1Q13136 1202 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 HIC1Q14526 733 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 SKIV2LQ15477 1246 aaKnown RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 TRIM71Q2Q1W2 868 aaKnown RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 TYW1BQ6NUM6 668 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 TMCO2Q7Z6W1 182 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 MXRA8Q9BRK3 442 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 JPH1Q9HDC5 661 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-207ENST00000489692 EMSYQ7Z589 1322 aa13.34□□□□□ -0.27
GGPS1-207ENST00000489692 DDX39AO00148 427 aaKnown RBP13.33□□□□□ -0.28
GGPS1-207ENST00000489692 MAFGO15525 162 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-207ENST00000489692 EFCAB14O75071 495 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 LGR5O75473 907 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 SCG2P13521 617 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
GGPS1-207ENST00000489692 DEFB103AP81534 67 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
GGPS1-207ENST00000489692 FUT2Q10981 343 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 RESTQ13127 1097 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 STK3Q13188 491 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 AP3B2Q13367 1082 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 PHKBQ93100 1093 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 PPP1R9BQ96SB3 815 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 SLC26A6Q9BXS9 759 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-207ENST00000489692 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 GDPD2Q9HCC8 539 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 C6orf50Q9HD87 102 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 KCNH7Q9NS40 1196 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-207ENST00000489692 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 TCEAL9Q9UHQ7 104 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 NRCAMQ92823 1304 aa13.33□□□□□ -0.28
GGPS1-207ENST00000489692 RFXAPO00287 272 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 JAK2O60674 1132 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 CXCL10P02778 98 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 AMHP03971 560 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
GGPS1-207ENST00000489692 ADGRE1Q14246 886 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 GPNMBQ14956 572 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 GRIK4Q16099 956 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
GGPS1-207ENST00000489692 CEP55Q53EZ4 464 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 MYOCDQ8IZQ8 938 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 DBF4BQ8NFT6 615 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 CYP2W1Q8TAV3 490 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 SEPT8Q92599 483 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 ANP32BQ92688 251 aaKnown RBP13.32□□□□□ -0.28
GGPS1-207ENST00000489692 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
GGPS1-207ENST00000489692 MTUS1Q9ULD2 1270 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 BAZ2BQ9UIF8 2168 aaKnown RBP13.32□□□□□ -0.28
GGPS1-207ENST00000489692 SCN10AQ9Y5Y9 1956 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 A0A0C4DFX4 3053 aa13.32□□□□□ -0.28
GGPS1-207ENST00000489692 GSTTP1A0A1W2PQM5 241 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 SYCE3A1L190 88 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 RBAK-RBAKDNI3L0D1 243 aa13.31□□□□□ -0.28
GGPS1-207ENST00000489692 CPLX1O14810 134 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms