RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 CDK5RAP3Q96JB5 506 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 ZNF333Q96JL9 665 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 HSD17B14Q9BPX1 270 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 MMTAG2Q9BU76 263 aaKnown RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 PAK6Q9NQU5 681 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-221ENST00000489562 LMBRD1Q9NUN5 540 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 SYNRGQ9UMZ2 1314 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 ARID2Q68CP9 1835 aa15.57■□□□□ 0.08
C9orf3-221ENST00000489562 PP2D1A8MPX8 630 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 LGR5O75473 907 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 LYPLA2O95372 231 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 C6orf222P0C671 652 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-221ENST00000489562 CCL5P13501 91 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 CAPN2P17655 700 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 SPECC1Q5M775 1068 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 PLPPR4Q7Z2D5 763 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 PCSK9Q8NBP7 692 aaKnown RBP15.56■□□□□ 0.08
C9orf3-221ENST00000489562 LENG1Q96BZ8 264 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-221ENST00000489562 LXNQ9BS40 222 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 UNC93B1Q9H1C4 597 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 SMARCAD1Q9H4L7 1026 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 ZNF302Q9NR11 478 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 ZNF215Q9UL58 517 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-221ENST00000489562 KCNH3Q9ULD8 1083 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 IGSF9BQ9UPX0 1349 aa15.56■□□□□ 0.08
C9orf3-221ENST00000489562 SCN10AQ9Y5Y9 1956 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 POTEFA5A3E0 1075 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 ADAMTS4O75173 837 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 MED24O75448 989 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 SLITRK3O94933 977 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 LGALS2P05162 132 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 SPATA31C1P0DKV0 1188 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 PFKFB1P16118 471 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 CDC25AP30304 524 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 STAT5BP51692 787 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 CYP4A11Q02928 519 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 GNASQ5JWF2 1037 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 LHX8Q68G74 356 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 SWSAP1Q6NVH7 229 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 USP49Q70CQ1 688 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 RNF180Q86T96 592 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 CATSPER3Q86XQ3 398 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 CCDC60Q8IWA6 550 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-221ENST00000489562 C4orf19Q8IY42 314 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 ARRDC4Q8NCT1 418 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 GLG1Q92896 1179 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 DYDC2Q96IM9 177 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 FAM167AQ96KS9 214 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 RNF208Q9H0X6 261 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 RGL1Q9NZL6 768 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 GABBR1Q9UBS5 961 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 STK17AQ9UEE5 414 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 USP25Q9UHP3 1055 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 HPSEQ9Y251 543 aa15.55■□□□□ 0.08
C9orf3-221ENST00000489562 MAFBQ9Y5Q3 323 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-221ENST00000489562 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 CTAGE5O15320 804 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 GADD45BO75293 160 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-221ENST00000489562 MBD3O95983 291 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 PGK1P00558 417 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 XRCC6P12956 609 aaKnown RBP eCLIP15.54■□□□□ 0.08
C9orf3-221ENST00000489562 PTGS1P23219 599 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 SYKP43405 635 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 KARSQ15046 597 aaKnown RBP15.54■□□□□ 0.08
C9orf3-221ENST00000489562 TMEM119Q4V9L6 283 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 RRAGBQ5VZM2 374 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 PDXDC2PQ6P474 469 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 TPH2Q8IWU9 490 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 BANK1Q8NDB2 785 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 KLHDC9Q8NEP7 349 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 NACC1Q96RE7 527 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 KATNAL1Q9BW62 490 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 MCOLN1Q9GZU1 580 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 CUEDC2Q9H467 287 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 ERAP1Q9NZ08 941 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 TELO2Q9Y4R8 837 aa15.54■□□□□ 0.08
C9orf3-221ENST00000489562 HTTP42858 3142 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 CAPN15O75808 1086 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 PLCG1P19174 1290 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 STAT6P42226 847 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 GRB10Q13322 594 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 CTTNQ14247 550 aaKnown RBP15.53■□□□□ 0.08
C9orf3-221ENST00000489562 MTFR1Q15390 333 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 ZRSR1Q15695 479 aaKnown RBP15.53■□□□□ 0.08
C9orf3-221ENST00000489562 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 UTP14CQ5TAP6 766 aaKnown RBP15.53■□□□□ 0.08
C9orf3-221ENST00000489562 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 CCDC34Q96HJ3 373 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 PNMA5Q96PV4 448 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 PCYT2Q99447 389 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 TSEN34Q9BSV6 310 aaKnown RBP15.53■□□□□ 0.08
C9orf3-221ENST00000489562 MAGEF1Q9HAY2 307 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 DDX19AQ9NUU7 478 aaKnown RBP15.53■□□□□ 0.08
C9orf3-221ENST00000489562 KIAA1024Q9UPX6 916 aa15.53■□□□□ 0.08
C9orf3-221ENST00000489562 MOXD2PA6NHM9 499 aa15.52■□□□□ 0.08
C9orf3-221ENST00000489562 H3BRB1 525 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms