RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ITGB5P18084 799 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 BMPR1AP36894 532 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
SFXN3-207ENST00000489434 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
SFXN3-207ENST00000489434 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 HEATR3Q7Z4Q2 680 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 DNAJB3Q8WWF6 145 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 KHSRPQ92945 711 aaKnown RBP eCLIP13.66□□□□□ -0.22
SFXN3-207ENST00000489434 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
SFXN3-207ENST00000489434 PKD2L1Q9P0L9 805 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 TELO2Q9Y4R8 837 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 UBIAD1Q9Y5Z9 338 aa13.66□□□□□ -0.22
SFXN3-207ENST00000489434 PRR33A8MZF0 331 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 ENPP3O14638 875 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 IGBP1P78318 339 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 COL19A1Q14993 1142 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 UBE2SQ16763 222 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 FBXO47Q5MNV8 452 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
SFXN3-207ENST00000489434 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 CLP1Q92989 425 aaKnown RBP13.65□□□□□ -0.22
SFXN3-207ENST00000489434 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 UPF3BQ9BZI7 483 aaKnown RBP13.65□□□□□ -0.22
SFXN3-207ENST00000489434 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
SFXN3-207ENST00000489434 C11orf16Q9NQ32 467 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 JADE2Q9NQC1 790 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
SFXN3-207ENST00000489434 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
SFXN3-207ENST00000489434 RBAK-RBAKDNI3L0D1 243 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 DCXO43602 365 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 RXRAP19793 462 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 MGAT3Q09327 533 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 POP1Q99575 1024 aaKnown RBP13.64□□□□□ -0.23
SFXN3-207ENST00000489434 SLC9A2Q9UBY0 812 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
SFXN3-207ENST00000489434 hCG_1642624A0A1W2PR95 340 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 SLC27A2O14975 620 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 GRM6O15303 877 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 FOSP01100 380 aaPredicted RBP13.63□□□□□ -0.23
SFXN3-207ENST00000489434 STAG3L1P0CL83 205 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 INSRRP14616 1297 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
SFXN3-207ENST00000489434 ZP2Q05996 745 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 PAK2Q13177 524 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 NAALADL2Q58DX5 795 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 FAM43BQ6ZT52 329 aaPredicted RBP13.63□□□□□ -0.23
SFXN3-207ENST00000489434 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 MICU3Q86XE3 530 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 ADHFE1Q8IWW8 467 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
SFXN3-207ENST00000489434 TRIOO75962 3097 aa13.63□□□□□ -0.23
SFXN3-207ENST00000489434 DGKIO75912 1065 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 MMP1P03956 469 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 CD52P31358 61 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 SLC26A2P50443 739 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 STAT5BP51692 787 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 NAPAP54920 295 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 RAB11FIP4Q86YS3 637 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 NPAS4Q8IUM7 802 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
SFXN3-207ENST00000489434 NME8Q8N427 588 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 P2RX5Q93086 422 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 MXRA8Q9BRK3 442 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
SFXN3-207ENST00000489434 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 RC3H2Q9HBD1 1191 aaKnown RBP13.62□□□□□ -0.23
SFXN3-207ENST00000489434 RIC8AQ9NPQ8 531 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 ANO2Q9NQ90 1003 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 RBM28Q9NW13 759 aaKnown RBP13.62□□□□□ -0.23
SFXN3-207ENST00000489434 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 PCDHA2Q9Y5H9 948 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 TRPV2Q9Y5S1 764 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 C5orf42Q9H799 3197 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 NFASCO94856 1347 aa13.62□□□□□ -0.23
SFXN3-207ENST00000489434 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 SCG2P13521 617 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 ZNF76P36508 570 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 ADCY7P51828 1080 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 ACTR2P61160 394 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 HYAL1Q12794 435 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 CEP55Q53EZ4 464 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 PPP1R18Q6NYC8 613 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
SFXN3-207ENST00000489434 ZNF689Q96CS4 500 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms