RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 EPB41L1Q9H4G0 881 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 IPPKQ9H8X2 491 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 CNOT11Q9UKZ1 510 aaKnown RBP5.88□□□□□ -1.47
XRN1-213ENST00000489241 SIT1Q9Y3P8 196 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 NUB1Q9Y5A7 615 aa5.88□□□□□ -1.47
XRN1-213ENST00000489241 TCRBV16S1A1N1A0A5B0 115 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 ARVCFO00192 962 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 KRIT1O00522 736 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 C8BP07358 591 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 SRGAP2CP0DJJ0 459 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 GNAT1P11488 350 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 SPATS1Q496A3 300 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 PKN3Q6P5Z2 889 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 ETV3LQ6ZN32 361 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
XRN1-213ENST00000489241 C16orf59Q7L2K0 433 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 AHI1Q8N157 1196 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 LINC00482Q8N8I6 264 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 SEC14L1Q92503 715 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 ZBTB8AQ96BR9 441 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 PCDH18Q9HCL0 1135 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 PPARGC1AQ9UBK2 798 aaKnown RBP5.87□□□□□ -1.47
XRN1-213ENST00000489241 FBXL7Q9UJT9 491 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 WASHC2CQ9Y4E1 1318 aa5.87□□□□□ -1.47
XRN1-213ENST00000489241 WNT9AO14904 365 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 HGSO14964 777 aaPredicted RBP5.86□□□□□ -1.47
XRN1-213ENST00000489241 NOBOXO60393 691 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 RASGRP1O95267 797 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 SLC6A11P48066 632 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 SARSP49591 514 aaKnown RBP5.86□□□□□ -1.47
XRN1-213ENST00000489241 NEK4P51957 841 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 STRN3Q13033 797 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 SEPT7Q16181 437 aaKnown RBP5.86□□□□□ -1.47
XRN1-213ENST00000489241 CRY1Q16526 586 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 LHFPL2Q6ZUX7 228 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 DDX53Q86TM3 631 aaKnown RBP5.86□□□□□ -1.47
XRN1-213ENST00000489241 MIB1Q86YT6 1006 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 FMNL3Q8IVF7 1028 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 RAVER1Q8IY67 606 aaKnown RBP5.86□□□□□ -1.47
XRN1-213ENST00000489241 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 DDX11Q96FC9 970 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 KCNJ15Q99712 375 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 CHMP4AQ9BY43 222 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
XRN1-213ENST00000489241 SPATA6Q9NWH7 488 aaPredicted RBP5.86□□□□□ -1.47
XRN1-213ENST00000489241 PHLDB1Q86UU1 1377 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 KPNA6O60684 536 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 JMJD7P0C870 316 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 CNR2P34972 360 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 GUCY2FP51841 1108 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 DHCR24Q15392 516 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 STEAP3Q658P3 488 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 EP400NLQ6ZTU2 488 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 OTOP3Q7RTS5 596 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 ZNF761Q86XN6 746 aaPredicted RBP5.85□□□□□ -1.47
XRN1-213ENST00000489241 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.85□□□□□ -1.47
XRN1-213ENST00000489241 GORASP1Q9BQQ3 440 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 SLC6A20Q9NP91 592 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 CATSPERZQ9NTU4 200 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 EID1Q9Y6B2 187 aa5.85□□□□□ -1.47
XRN1-213ENST00000489241 K7ESM1 405 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 SGSM2O43147 1006 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 KATNA1O75449 491 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 PYGMP11217 842 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 CPEP16870 476 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 KCNA6P17658 529 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 THBS2P35442 1172 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 DNM2P50570 870 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 SMAD4Q13485 552 aaKnown RBP5.84□□□□□ -1.47
XRN1-213ENST00000489241 CFAP100Q494V2 611 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 HSP90AB2PQ58FF8 381 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 CDCA2Q69YH5 1023 aaPredicted RBP5.84□□□□□ -1.47
XRN1-213ENST00000489241 CYP4F22Q6NT55 531 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 ZC3H18Q86VM9 953 aaKnown RBP5.84□□□□□ -1.47
XRN1-213ENST00000489241 PHOSPHO1Q8TCT1 267 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 ADAMTS17Q8TE56 1095 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 C11orf84Q9BUA3 381 aaPredicted RBP5.84□□□□□ -1.47
XRN1-213ENST00000489241 CELF4Q9BZC1 486 aaKnown RBP5.84□□□□□ -1.47
XRN1-213ENST00000489241 SMOC1Q9H4F8 434 aa5.84□□□□□ -1.47
XRN1-213ENST00000489241 CCDC66A2RUB6 948 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 GPR39O43194 453 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 TADA3O75528 432 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 ALDH1L1O75891 902 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 STAT4Q14765 748 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 GPR19Q15760 415 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 EMC4Q5J8M3 183 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 ZCCHC8Q6NZY4 707 aaKnown RBP5.83□□□□□ -1.48
XRN1-213ENST00000489241 ABHD17CQ6PCB6 329 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 NECAB2Q7Z6G3 386 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 MILR1Q7Z6M3 343 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 TRIM48Q8IWZ4 208 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 NLGN4XQ8N0W4 816 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 KYQ8NBH2 561 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 PIP4K2CQ8TBX8 421 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 WDR66Q8TBY9 1149 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 ASPSCR1Q9BZE9 553 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 SAMD15Q9P1V8 674 aa5.83□□□□□ -1.48
XRN1-213ENST00000489241 ZNF652Q9Y2D9 606 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms