RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 TUBE1Q9UJT0 475 aa14.31□□□□□ -0.12
SRRM1-216ENST00000489130 IGLV3-22A0A075B6J6 115 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 RBAK-RBAKDNI3L0D1 243 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 PPFIA3O75145 1194 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 ATG7O95352 703 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 IGFBP4P22692 258 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 ZNF76P36508 570 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 MARCH8Q5T0T0 291 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 RUFY4Q6ZNE9 571 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 PLPPR4Q7Z2D5 763 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 CCDC148Q8NFR7 591 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 BICD2Q8TD16 824 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 OSBPL7Q9BZF2 842 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 AZI2Q9H6S1 392 aa14.3□□□□□ -0.12
SRRM1-216ENST00000489130 NCOA5Q9HCD5 579 aaKnown RBP14.3□□□□□ -0.12
SRRM1-216ENST00000489130 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 IGKV6D-21A0A0A0MT36 114 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 LCHNA4D1U4 455 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 EPOPA6NHQ4 379 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 RRN3P2A6NIE6 340 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 CCNE2O96020 404 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 POU3F3P20264 500 aaPredicted RBP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 SETQ01105 290 aaPredicted RBP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 PLA2G4DQ86XP0 818 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 SEPT8Q92599 483 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 APBB2Q92870 758 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 ZNF274Q96GC6 653 aaPredicted RBP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 RAD9AQ99638 391 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 COL25A1Q9BXS0 654 aaPredicted RBP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
SRRM1-216ENST00000489130 SH3GLB2Q9NR46 395 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 VPS54Q9P1Q0 977 aa14.29□□□□□ -0.12
SRRM1-216ENST00000489130 IPO5O00410 1097 aaKnown RBP14.28□□□□□ -0.12
SRRM1-216ENST00000489130 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
SRRM1-216ENST00000489130 CHRNA1P02708 482 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 AMHP03971 560 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 RPLP2P05387 115 aaKnown RBP14.28□□□□□ -0.12
SRRM1-216ENST00000489130 INSRRP14616 1297 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 CIITAP33076 1130 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 SLC26A2P50443 739 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 STAT5BP51692 787 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 MGAT3Q09327 533 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 ABHD15Q6UXT9 468 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 TRIM22Q8IYM9 498 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 RASGRP4Q8TDF6 673 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 TNPO1Q92973 898 aaKnown RBP14.28□□□□□ -0.12
SRRM1-216ENST00000489130 IFIH1Q9BYX4 1025 aaKnown RBP14.28□□□□□ -0.12
SRRM1-216ENST00000489130 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
SRRM1-216ENST00000489130 RFXAPO00287 272 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 HTRA4P83105 476 aaPredicted RBP14.27□□□□□ -0.13
SRRM1-216ENST00000489130 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 PPM1EQ8WY54 764 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 PDRG1Q9NUG6 133 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 TRPC6Q9Y210 931 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 INSL6Q9Y581 213 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.13
SRRM1-216ENST00000489130 MICAL3Q7RTP6 2002 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.26□□□□□ -0.13
SRRM1-216ENST00000489130 POTEB3A0JP26 581 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 LINC01553A4QN01 128 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
SRRM1-216ENST00000489130 CPLX1O14810 134 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 IGBP1P78318 339 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 SSRP1Q08945 709 aaKnown RBP14.26□□□□□ -0.13
SRRM1-216ENST00000489130 CCDC85BQ15834 202 aaPredicted RBP14.26□□□□□ -0.13
SRRM1-216ENST00000489130 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
SRRM1-216ENST00000489130 FAM117BQ6P1L5 589 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 POTEBQ6S5H4 581 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 CCDC60Q8IWA6 550 aaPredicted RBP14.26□□□□□ -0.13
SRRM1-216ENST00000489130 ATP8B4Q8TF62 1192 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 TOP1MTQ969P6 601 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 LENG9Q96B70 501 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 ZNF577Q9BSK1 485 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 PRDM6Q9NQX0 595 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 TBC1D22BQ9NU19 505 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
SRRM1-216ENST00000489130 SIP14410 1827 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 BACH1O14867 736 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 GTPBP6O43824 516 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-216ENST00000489130 EDIL3O43854 480 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 LPXNO60711 386 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 DEXIO95424 95 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 GHRP10912 638 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 USP11P51784 963 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 NLRP5P59047 1200 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 ANAPC15P60006 121 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 ERVK-21P61565 698 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 MRPS6P82932 125 aaKnown RBP14.25□□□□□ -0.13
SRRM1-216ENST00000489130 GRB10Q13322 594 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 LPIN1Q14693 890 aa14.25□□□□□ -0.13
SRRM1-216ENST00000489130 PRR16Q569H4 304 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms