RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CAND2O75155 1236 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 CTSHP09668 335 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 CIITAP33076 1130 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 MARCH8Q5T0T0 291 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 AZI2Q9H6S1 392 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 MICAL3Q7RTP6 2002 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 SIP14410 1827 aa28.41■■■□□ 2.14
HMGN1-217ENST00000489072 IPO5O00410 1097 aaKnown RBP28.4■■■□□ 2.14
HMGN1-217ENST00000489072 FOSL2P15408 326 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 NPY5RQ15761 445 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 HERC6Q8IVU3 1022 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 LENG9Q96B70 501 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 ZNF577Q9BSK1 485 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 SLC28A3Q9HAS3 691 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 PCDHA4Q9UN74 947 aa28.4■■■□□ 2.14
HMGN1-217ENST00000489072 UNC80Q8N2C7 3258 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 IGKV6D-21A0A0A0MT36 114 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 MBLAC1A4D2B0 266 aaPredicted RBP28.39■■■□□ 2.14
HMGN1-217ENST00000489072 INSRRP14616 1297 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 KCNJ6P48051 423 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 STAT5BP51692 787 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 DEFB103AP81534 67 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 SETQ01105 290 aaPredicted RBP28.39■■■□□ 2.14
HMGN1-217ENST00000489072 PLCB4Q15147 1175 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 PRR16Q569H4 304 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 ABHD15Q6UXT9 468 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 PLPPR4Q7Z2D5 763 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 ZBTB10Q96DT7 871 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 PRDM12Q9H4Q4 367 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 TUBE1Q9UJT0 475 aa28.39■■■□□ 2.14
HMGN1-217ENST00000489072 TRANK1O15050 2925 aa28.39■■■□□ 2.13
HMGN1-217ENST00000489072 WDR81Q562E7 1941 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 ABHD14A-ACY1A0A1B0GW23 586 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 M0R2N6 131 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 CTDNEP1O95476 244 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 IGBP1P78318 339 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 ANKRD1Q15327 319 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 FAM26DQ5JW98 314 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 TMCO2Q7Z6W1 182 aaPredicted RBP28.38■■■□□ 2.13
HMGN1-217ENST00000489072 BLIDQ8IZY5 108 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 DAGLBQ8NCG7 672 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 SLC17A8Q8NDX2 589 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 DBF4BQ8NFT6 615 aa28.38■■■□□ 2.13
HMGN1-217ENST00000489072 MYH9P35579 1960 aaKnown RBP28.37■■■□□ 2.13
HMGN1-217ENST00000489072 EIF5BO60841 1220 aaKnown RBP28.37■■■□□ 2.13
HMGN1-217ENST00000489072 CDKL5O76039 1030 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 CA3P07451 260 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 IKBKEQ14164 716 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 PLEKHG4Q58EX7 1191 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 PPP2R2DQ66LE6 453 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 RPAINQ86UA6 219 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 MAFAQ8NHW3 353 aaPredicted RBP28.37■■■□□ 2.13
HMGN1-217ENST00000489072 TRPC6Q9Y210 931 aa28.37■■■□□ 2.13
HMGN1-217ENST00000489072 LARGE1O95461 756 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 MKRN4PQ13434 485 aaPredicted RBP28.36■■■□□ 2.13
HMGN1-217ENST00000489072 TAF2Q6P1X5 1199 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 CCDC60Q8IWA6 550 aaPredicted RBP28.36■■■□□ 2.13
HMGN1-217ENST00000489072 FAM177A1Q8N128 213 aaPredicted RBP28.36■■■□□ 2.13
HMGN1-217ENST00000489072 TBCKQ8TEA7 893 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 TRAPPC12Q8WVT3 735 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 TBC1D22BQ9NU19 505 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 KCNJ14Q9UNX9 436 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 STK36Q9NRP7 1315 aa28.36■■■□□ 2.13
HMGN1-217ENST00000489072 RRN3P2A6NIE6 340 aa28.35■■■□□ 2.13
HMGN1-217ENST00000489072 ARHGEF15O94989 841 aa28.35■■■□□ 2.13
HMGN1-217ENST00000489072 CHRNA1P02708 482 aa28.35■■■□□ 2.13
HMGN1-217ENST00000489072 USP11P51784 963 aa28.35■■■□□ 2.13
HMGN1-217ENST00000489072 ME3Q16798 604 aa28.35■■■□□ 2.13
HMGN1-217ENST00000489072 BACH1O14867 736 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 MSH4O15457 936 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 EFCAB14O75071 495 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 NEK4P51957 841 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 MGAT3Q09327 533 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 ZNF746Q6NUN9 644 aaPredicted RBP28.34■■■□□ 2.13
HMGN1-217ENST00000489072 NECAB1Q8N987 351 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 DNAJB3Q8WWF6 145 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 GJB4Q9NTQ9 266 aa28.34■■■□□ 2.13
HMGN1-217ENST00000489072 POTEB3A0JP26 581 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 SLC26A2P50443 739 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 ADGRE1Q14246 886 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 FAM160B1Q5W0V3 765 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 GALNT17Q6IS24 598 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 SWSAP1Q6NVH7 229 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 MIS18BP1Q6P0N0 1132 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 POTEBQ6S5H4 581 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.33■■■□□ 2.132e-8■■■□□ 17.8
HMGN1-217ENST00000489072 PHF20Q9BVI0 1012 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 ZNF302Q9NR11 478 aa28.33■■■□□ 2.13
HMGN1-217ENST00000489072 LOXHD1Q8IVV2 1947 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 KIF28PB7ZC32 967 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 TLL1O43897 1013 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 ATP4AP20648 1035 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 SEPT8Q92599 483 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 GTF3C6Q969F1 213 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 C22orf23Q9BZE7 217 aa28.32■■■□□ 2.12
HMGN1-217ENST00000489072 EVPLQ92817 2033 aa28.31■■■□□ 2.12
HMGN1-217ENST00000489072 LCHNA4D1U4 455 aa28.31■■■□□ 2.12
HMGN1-217ENST00000489072 TDP2O95551 362 aa28.31■■■□□ 2.12
HMGN1-217ENST00000489072 KRT76Q01546 638 aa28.31■■■□□ 2.12
HMGN1-217ENST00000489072 C8orf34Q49A92 452 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms