RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ZNF761Q86XN6 746 aaPredicted RBP3.88□□□□□ -1.79
CALD1-221ENST00000489019 PROSER1Q86XN7 944 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 LILRB2Q8N423 598 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 ZSWIM3Q96MP5 696 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 OSBPL2Q9H1P3 480 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 RTEL1Q9NZ71 1219 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 GPATCH8Q9UKJ3 1502 aaKnown RBP3.88□□□□□ -1.79
CALD1-221ENST00000489019 KDM6BO15054 1643 aa3.88□□□□□ -1.79
CALD1-221ENST00000489019 ADGBQ8N7X0 1667 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 ARVCFO00192 962 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 AQP7O14520 342 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 WNT9AO14904 365 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PRICKLE3O43900 615 aaPredicted RBP3.87□□□□□ -1.79
CALD1-221ENST00000489019 SMARCA5O60264 1052 aaPredicted RBP3.87□□□□□ -1.79
CALD1-221ENST00000489019 NOBOXO60393 691 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 MAFKO60675 156 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 CRTAMO95727 393 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 EPHA5P54756 1037 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 GABREP78334 506 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 GUCY1A3Q02108 690 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 SPIRE1Q08AE8 756 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PAK1Q13153 545 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 TUSC3Q13454 348 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PHF19Q5T6S3 580 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 SOGA3Q5TF21 947 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 TMC5Q6UXY8 1006 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 TTLL7Q6ZT98 887 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 DPH6Q7L8W6 267 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 TTLL6Q8N841 843 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 TTLL11Q8NHH1 800 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PCDH19Q8TAB3 1148 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 SLC7A14Q8TBB6 771 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 ADAMTS17Q8TE56 1095 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 ALG1Q9BT22 464 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 CD244Q9BZW8 370 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PDGFDQ9GZP0 370 aaPredicted RBP3.87□□□□□ -1.79
CALD1-221ENST00000489019 SLC52A2Q9HAB3 445 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PCDH18Q9HCL0 1135 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 NGRNQ9NPE2 291 aaKnown RBP3.87□□□□□ -1.79
CALD1-221ENST00000489019 HSPBP1Q9NZL4 362 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 DSEQ9UL01 958 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 PCDHA9Q9Y5H5 950 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 DUSP10Q9Y6W6 482 aa3.87□□□□□ -1.79
CALD1-221ENST00000489019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 ACOT7O00154 380 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 DDX3XO00571 662 aaKnown RBP eCLIP3.86□□□□□ -1.79
CALD1-221ENST00000489019 AMY2AP04746 511 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 HMGB1P09429 215 aaKnown RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 PYGMP11217 842 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 HSP90B1P14625 803 aaKnown RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 AMY2BP19961 511 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 HNRNPMP52272 730 aaKnown RBP eCLIP3.86□□□□□ -1.79
CALD1-221ENST00000489019 MLLT6P55198 1093 aaPredicted RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 BMS1Q14692 1282 aaKnown RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 NFIXQ14938 502 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 PAN2Q504Q3 1202 aaKnown RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 C2orf27AQ580R0 203 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 MCTP2Q6DN12 878 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 KCTD1Q719H9 257 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 FRMD5Q7Z6J6 570 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 TRIM48Q8IWZ4 208 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 GSTCDQ8NEC7 633 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 THAP3Q8WTV1 239 aaPredicted RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 RELTQ969Z4 430 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 SCLYQ96I15 445 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 IPO9Q96P70 1041 aaKnown RBP3.86□□□□□ -1.79
CALD1-221ENST00000489019 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 KANSL2Q9H9L4 492 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 CBLCQ9ULV8 474 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 PTCH2Q9Y6C5 1203 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 CROCC2H7BZ55 1655 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 C9orf84Q5VXU9 1444 aa3.86□□□□□ -1.79
CALD1-221ENST00000489019 ARHGAP5Q13017 1502 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 CDC42BPAQ5VT25 1732 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 FOXD2O60548 495 aaPredicted RBP3.85□□□□□ -1.79
CALD1-221ENST00000489019 RASGRP1O95267 797 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 CKMP06732 381 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 SRGAP2CP0DJJ0 459 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 HSPA5P11021 654 aaKnown RBP3.85□□□□□ -1.79
CALD1-221ENST00000489019 PDE6AP16499 860 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 FAHP16930 419 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 ZNF28P17035 718 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 CDK11BP21127 795 aaKnown RBP3.85□□□□□ -1.79
CALD1-221ENST00000489019 RGL3Q3MIN7 710 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 TRIM61Q5EBN2 209 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 ZC3H12BQ5HYM0 836 aaKnown RBP3.85□□□□□ -1.79
CALD1-221ENST00000489019 CD276Q5ZPR3 534 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 ARHGAP36Q6ZRI8 547 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 FERMT3Q86UX7 667 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 OSTM1Q86WC4 334 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 TXNDC5Q8NBS9 432 aaKnown RBP3.85□□□□□ -1.79
CALD1-221ENST00000489019 ZCCHC14Q8WYQ9 949 aaKnown RBP3.85□□□□□ -1.79
CALD1-221ENST00000489019 TEPSINQ96N21 525 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 LNPKQ9C0E8 428 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 USP40Q9NVE5 1235 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 NDOR1Q9UHB4 597 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 NCOA1Q15788 1441 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 ANKRD50Q9ULJ7 1429 aa3.85□□□□□ -1.79
CALD1-221ENST00000489019 ADGRL2O95490 1459 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms