RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RAET1EQ8TD07 263 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 SEPT1Q8WYJ6 367 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 GPR20Q99678 358 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 NUP62CLQ9H1M0 184 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 KIAA1024Q9UPX6 916 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 Q9Y3F1 56 aa17.94■□□□□ 0.46
CLDN11-208ENST00000488989 ARID2Q68CP9 1835 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 CEP350Q5VT06 3117 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 POTEFA5A3E0 1075 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 CTAGE5O15320 804 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 ADCY6O43306 1168 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 LGR5O75473 907 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 CYP4A11Q02928 519 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 CTTNQ14247 550 aaKnown RBP17.93■□□□□ 0.46
CLDN11-208ENST00000488989 HSDL1Q3SXM5 330 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 POTEGQ6S5H5 508 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 C4orf19Q8IY42 314 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 CEP57L1Q8IYX8 460 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 SLAIN1Q8ND83 568 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 RASSF8Q8NHQ8 419 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 LXNQ9BS40 222 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 ZSWIM4Q9H7M6 989 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 KBTBD4Q9NVX7 518 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 WRAP73Q9P2S5 460 aaPredicted RBP17.93■□□□□ 0.46
CLDN11-208ENST00000488989 SAMM50Q9Y512 469 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
CLDN11-208ENST00000488989 DKC1O60832 514 aaKnown RBP eCLIP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 AKR1A1P14550 325 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 ELNP15502 786 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 PSMC5P62195 406 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 MDM2Q00987 491 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 CACNB2Q08289 660 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 ZRSR1Q15695 479 aaKnown RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 GJC2Q5T442 439 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 CCDC60Q8IWA6 550 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 PPTC7Q8NI37 304 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 AFAP1L1Q8TED9 768 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 LARP4BQ92615 738 aaKnown RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 RAD54LQ92698 747 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 CCDC34Q96HJ3 373 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 SPATA33Q96N06 139 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 PCYT2Q99447 389 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 PLIN2Q99541 437 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 MTRQ99707 1265 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
CLDN11-208ENST00000488989 MAFBQ9Y5Q3 323 aaPredicted RBP17.92■□□□□ 0.46
CLDN11-208ENST00000488989 SEPT4O43236 478 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 SORBS3O60504 671 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 EYA4O95677 639 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 HSPA8P11142 646 aaKnown RBP17.91■□□□□ 0.46
CLDN11-208ENST00000488989 NKX3-2P78367 333 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 SP4Q02446 784 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 TRIM32Q13049 653 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 UGCGQ16739 394 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 TPH2Q8IWU9 490 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 BANK1Q8NDB2 785 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 ATP6V0A1Q93050 837 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 PAGE5Q96GU1 130 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 NACC1Q96RE7 527 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 GABBR1Q9UBS5 961 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 DNM3Q9UQ16 869 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 EMSYQ7Z589 1322 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
CLDN11-208ENST00000488989 E9PMD0 336 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 NOP56O00567 594 aaKnown RBP17.9■□□□□ 0.46
CLDN11-208ENST00000488989 ZNF862O60290 1169 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 DUSP11O75319 330 aaKnown RBP17.9■□□□□ 0.46
CLDN11-208ENST00000488989 STBD1O95210 358 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 MYL1P05976 194 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 PTGS1P23219 599 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 TCF7P36402 384 aaPredicted RBP17.9■□□□□ 0.46
CLDN11-208ENST00000488989 PSMC6P62333 389 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 SWSAP1Q6NVH7 229 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 OR6J1Q8NGC5 347 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 ZNF302Q9NR11 478 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 HOOK1Q9UJC3 728 aaKnown RBP17.9■□□□□ 0.46
CLDN11-208ENST00000488989 DBR1Q9UK59 544 aaKnown RBP17.9■□□□□ 0.46
CLDN11-208ENST00000488989 PTPN22Q9Y2R2 807 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 PTCH2Q9Y6C5 1203 aa17.9■□□□□ 0.46
CLDN11-208ENST00000488989 A6NJR5 290 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 FOXN1O15353 648 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 PPFIA4O75335 1185 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 LETM1O95202 739 aaPredicted RBP17.89■□□□□ 0.45
CLDN11-208ENST00000488989 PLA2G4BP0C869 781 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 PRKAR2AP13861 404 aaKnown RBP17.89■□□□□ 0.45
CLDN11-208ENST00000488989 GRK4P32298 578 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 SLC12A3P55017 1021 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 MCM6Q14566 821 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 POSTNQ15063 836 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 CAMK4Q16566 473 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 FAM160B1Q5W0V3 765 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 CNNM4Q6P4Q7 775 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 SV2BQ7L1I2 683 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 PLPPR4Q7Z2D5 763 aa17.89■□□□□ 0.45
CLDN11-208ENST00000488989 TLK2Q86UE8 772 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms