RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PCSK5Q92824 1860 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 NEMP1O14524 444 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ERC2O15083 957 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 SLC26A4O43511 780 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 USP2O75604 605 aaPredicted RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 UBOX5O94941 541 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ASLP04424 464 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 FGFR1P11362 822 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 NME1P15531 152 aaKnown RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 LPOP22079 712 aaPredicted RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 RPL10P27635 214 aaKnown RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 COPB2P35606 906 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 GALK1P51570 392 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ERVK-21P61565 698 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 SUMO1P63165 101 aaKnown RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 KRT85P78386 507 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 TMPRSS15P98073 1019 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 KLF10Q13118 480 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 GTF2H3Q13889 308 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 GPR158Q5T848 1215 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ANO1Q5XXA6 986 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ICE2Q659A1 982 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 KIAA1211LQ6NV74 962 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 FAM43BQ6ZT52 329 aaPredicted RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 TMC6Q7Z403 805 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 IGDCC3Q8IVU1 814 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 IFNL2Q8IZJ0 200 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 NKAPQ8N5F7 415 aaKnown RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ANKRD42Q8N9B4 389 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 SLC7A14Q8TBB6 771 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 SH3RF3Q8TEJ3 882 aaPredicted RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 SNRNP27Q8WVK2 155 aaKnown RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ATG4CQ96DT6 458 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 MAP6Q96JE9 813 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 NEUROD6Q96NK8 337 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 AIFM3Q96NN9 605 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 TTC1Q99614 292 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 AARSD1Q9BTE6 412 aaKnown RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 G6PC3Q9BUM1 346 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 IP6K2Q9UHH9 426 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ZNF214Q9UL59 606 aaPredicted RBP4.22□□□□□ -1.73
PRPF4-203ENST00000488937 PHTF1Q9UMS5 762 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 ZNF281Q9Y2X9 895 aa4.22□□□□□ -1.73
PRPF4-203ENST00000488937 SSU72P8A0A1W2PR75 194 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 NOTOA8MTQ0 251 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 EPB41L2O43491 1005 aaKnown RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 BUB1BO60566 1050 aaPredicted RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 RNASEH2AO75792 299 aaKnown RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 PRKD3O94806 890 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 ENDOUP21128 410 aaKnown RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 ECE1P42892 770 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 SLC7A5Q01650 507 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 GRB10Q13322 594 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 HSP90AA2PQ14568 343 aaPredicted RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 ZNF460Q14592 562 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 GRM3Q14832 879 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 COBLL1Q53SF7 1204 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 GALNT18Q6P9A2 607 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 NLRC3Q7RTR2 1065 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 DRC7Q8IY82 874 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 FAM43AQ8N2R8 423 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 CPA6Q8N4T0 437 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 TTC17Q96AE7 1141 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 KREMEN1Q96MU8 473 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 CDC6Q99741 560 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 ANLNQ9NQW6 1124 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 SUCOQ9UBS9 1254 aaKnown RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 SUSD2Q9UGT4 822 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 EBF1Q9UH73 591 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 PCDHB10Q9UN67 800 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 ANKRD6Q9Y2G4 727 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 PTPN22Q9Y2R2 807 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 LUC7L2Q9Y383 392 aaKnown RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 PCDHA5Q9Y5H7 936 aa4.21□□□□□ -1.74
PRPF4-203ENST00000488937 TNPO3Q9Y5L0 923 aaKnown RBP4.21□□□□□ -1.74
PRPF4-203ENST00000488937 ABHD14A-ACY1A0A1B0GW23 586 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 AGRPO00253 132 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 FFAR3O14843 346 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 ASGR2P07307 311 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 RAG1P15918 1043 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 CYP2C19P33261 490 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 ID4P47928 161 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 PPP2R2AP63151 447 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 TARBP2Q15633 366 aaKnown RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 CSRP2Q16527 193 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 PTPN21Q16825 1174 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 ABCB5Q2M3G0 1257 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 HYIQ5T013 277 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 NT5DC1Q5TFE4 455 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 CHST15Q7LFX5 561 aaPredicted RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 BRAPQ7Z569 592 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 WAPLQ7Z5K2 1190 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 FGD2Q7Z6J4 655 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 PDILTQ8N807 584 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 ZNF513Q8N8E2 541 aaPredicted RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 DVL3Q92997 716 aaPredicted RBP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 OSBP2Q969R2 916 aa4.2□□□□□ -1.74
PRPF4-203ENST00000488937 FUBP3Q96I24 572 aaKnown RBP eCLIP4.2□□□□□ -1.74
PRPF4-203ENST00000488937 SLC9A7Q96T83 725 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 287.3 ms