RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 OSBPL7Q9BZF2 842 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 CRNKL1Q9BZJ0 848 aaKnown RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 BCL11AQ9H165 835 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 BOLA2Q9H3K6 86 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 PIH1D3Q9NQM4 214 aaKnown RBP6.14□□□□□ -1.43
SF3A3-207ENST00000488934 GINM1Q9NU53 330 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 RNF186Q9NXI6 227 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 ZNF112Q9UJU3 913 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 FZD1Q9UP38 647 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 SNCAIPQ9Y6H5 919 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 FLT1P17948 1338 aa6.14□□□□□ -1.43
SF3A3-207ENST00000488934 SIPA1L1O43166 1804 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 PHIPQ8WWQ0 1821 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 FOSL1P15407 271 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 PDE6AP16499 860 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 MX1P20591 662 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 ADD2P35612 726 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 ARHGEF6Q15052 776 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 UBE3CQ15386 1083 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 PKN2Q16513 984 aaKnown RBP6.13□□□□□ -1.43
SF3A3-207ENST00000488934 MIGA2Q7L4E1 593 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 PDZD3Q86UT5 571 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 TICAM2Q86XR7 235 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 FOXP4Q8IVH2 680 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-207ENST00000488934 TGFBRAP1Q8WUH2 860 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 ZKSCAN4Q969J2 545 aaPredicted RBP6.13□□□□□ -1.43
SF3A3-207ENST00000488934 ANTXR1Q9H6X2 564 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 AS3MTQ9HBK9 375 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 DDX4Q9NQI0 724 aaKnown RBP6.13□□□□□ -1.43
SF3A3-207ENST00000488934 PPP1R9AQ9ULJ8 1098 aa6.13□□□□□ -1.43
SF3A3-207ENST00000488934 CCL15-CCL14A0A0B4J2E2 113 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ANKRD33BA6NCL7 494 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 DDTLA6NHG4 134 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 LOC285556D6RIA3 1793 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 CXCL11O14625 94 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 CYP26A1O43174 497 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SMARCA5O60264 1052 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ZNF862O60290 1169 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 RNGTTO60942 597 aaKnown RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ASNSP08243 561 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 USP17L7P0C7H9 530 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ERCC3P19447 782 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 CCL15Q16663 113 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 CYP27C1Q4G0S4 372 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 LLGL2Q6P1M3 1020 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SV2BQ7L1I2 683 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 FASTKD5Q7L8L6 764 aaKnown RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ADGRA1Q86SQ6 560 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 DTX1Q86Y01 620 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 MAPKAPK5Q8IW41 473 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SMYD4Q8IYR2 804 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 KBTBD3Q8NAB2 608 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 MIGA1Q8NAN2 632 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ERO1AQ96HE7 468 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 FANCD2OSQ96PS1 177 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ZNF532Q9HCE3 1301 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SSU72Q9NP77 194 aaKnown RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 ATP8A2Q9NTI2 1148 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 BAZ2AQ9UIF9 1905 aaKnown RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SERPINB13Q9UIV8 391 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 CYP8B1Q9UNU6 501 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SLC45A1Q9Y2W3 748 aa6.12□□□□□ -1.43
SF3A3-207ENST00000488934 SUPT16HQ9Y5B9 1047 aaKnown RBP6.12□□□□□ -1.43
SF3A3-207ENST00000488934 TCRBV5S4A2TA0A5A2 114 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ENC1O14682 589 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 FKTNO75072 461 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 TBC1D8O95759 1140 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 WNT11O96014 354 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 GNAT2P19087 354 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 CAP2P40123 477 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ERVK-24P63145 666 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 PABPC4Q13310 644 aaKnown RBP eCLIP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 TAF1CQ15572 869 aaPredicted RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 CTU1Q7Z7A3 348 aaKnown RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ANKRD23Q86SG2 305 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 METTL16Q86W50 562 aaKnown RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ZFPM1Q8IX07 1006 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 SMC5Q8IY18 1101 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 APPBP2Q92624 585 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 WDR89Q96FK6 387 aaPredicted RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 RIOK1Q9BRS2 568 aaKnown RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 MCM9Q9NXL9 1143 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ARPP21Q9UBL0 812 aaPredicted RBP6.11□□□□□ -1.43
SF3A3-207ENST00000488934 SWAP70Q9UH65 585 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 PCOLCE2Q9UKZ9 415 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 PALD1Q9ULE6 856 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 ZHX2Q9Y6X8 837 aa6.11□□□□□ -1.43
SF3A3-207ENST00000488934 A0A0G2JLL6 359 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-207ENST00000488934 C19orf81C9J6K1 198 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 RNF113AO15541 343 aaKnown RBP6.1□□□□□ -1.43
SF3A3-207ENST00000488934 TLR2O60603 784 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 FBXO24O75426 580 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 MBD4O95243 580 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 SPINK2P20155 84 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 DYNLL1P63167 89 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms