RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MBTPS1Q14703 1052 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 GRIK4Q16099 956 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 ZBED2Q9BTP6 218 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 PDRG1Q9NUG6 133 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 TCEAL9Q9UHQ7 104 aa15.71■□□□□ 0.11
SPTLC1-207ENST00000488921 RRN3P2A6NIE6 340 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 FAM86B1E9PN63 330 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 DEXIO95424 95 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 FAM86B2P0C5J1 330 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 ITGB3BPQ13352 177 aaPredicted RBP15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 PLEKHG4Q58EX7 1191 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 PLPPR4Q7Z2D5 763 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 RPAINQ86UA6 219 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 FAM177A1Q8N128 213 aaPredicted RBP15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 CRYGNQ8WXF5 182 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 SEPT8Q92599 483 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 APBB2Q92870 758 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 C22orf23Q9BZE7 217 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 VPS54Q9P1Q0 977 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 TRPC6Q9Y210 931 aa15.7■□□□□ 0.1
SPTLC1-207ENST00000488921 LOXHD1Q8IVV2 1947 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 IGLV3-22A0A075B6J6 115 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 MBLAC1A4D2B0 266 aaPredicted RBP15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 IPO5O00410 1097 aaKnown RBP15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 CDKL5O76039 1030 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 GJB5O95377 273 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 AMHP03971 560 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 STAT5BP51692 787 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 NLRP5P59047 1200 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 DEFB103AP81534 67 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 FAM26DQ5JW98 314 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 FAM160B1Q5W0V3 765 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 DBF4BQ8NFT6 615 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 TBC1D22BQ9NU19 505 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 CHD7Q9P2D1 2997 aa15.69■□□□□ 0.1
SPTLC1-207ENST00000488921 DDX39AO00148 427 aaKnown RBP15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 PPFIA3O75145 1194 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 ATG7O95352 703 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 IGFBP4P22692 258 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 STK3Q13188 491 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 ANKRD1Q15327 319 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 PCYT2Q99447 389 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 RAD9AQ99638 391 aa15.68■□□□□ 0.1
SPTLC1-207ENST00000488921 NLRC5Q86WI3 1866 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 COL4A6Q14031 1691 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 BACH1O14867 736 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 INSRRP14616 1297 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 CIITAP33076 1130 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 IGBP1P78318 339 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 KRT76Q01546 638 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 TAP1Q03518 808 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 PLCB4Q15147 1175 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 TCTN1Q2MV58 587 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 ZNF746Q6NUN9 644 aaPredicted RBP15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 MIS18BP1Q6P0N0 1132 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 RUFY4Q6ZNE9 571 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 SMAP1Q8IYB5 467 aaPredicted RBP15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 RASGRP4Q8TDF6 673 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 IFIH1Q9BYX4 1025 aaKnown RBP15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 PCDHA4Q9UN74 947 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 PRUNE2Q8WUY3 3088 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 RALGAPA2Q2PPJ7 1873 aa15.67■□□□□ 0.1
SPTLC1-207ENST00000488921 COL1A2P08123 1366 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 IGKV6D-21A0A0A0MT36 114 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 POTEB3A0JP26 581 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 M0QZ92 97 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 CCNE2O96020 404 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 USP11P51784 963 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 ADGRE1Q14246 886 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 PRR16Q569H4 304 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 MARCH8Q5T0T0 291 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 POTEBQ6S5H4 581 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 ABHD15Q6UXT9 468 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 MYOCDQ8IZQ8 938 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 SLKQ9H2G2 1235 aaPredicted RBP15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 ZNF302Q9NR11 478 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 STK36Q9NRP7 1315 aa15.66■□□□□ 0.1
SPTLC1-207ENST00000488921 DLL1O00548 723 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 ADAMTS3O15072 1205 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 DHX15O43143 795 aaKnown RBP15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 HBP1O60381 514 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 XBP1P17861 261 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 MRPS6P82932 125 aaKnown RBP15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 MGAT3Q09327 533 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 IER5Q5VY09 327 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 PDXDC2PQ6P474 469 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 CCDC60Q8IWA6 550 aaPredicted RBP15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 DAGLBQ8NCG7 672 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 ATP8B4Q8TF62 1192 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 DNAJB3Q8WWF6 145 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 ARNTL2Q8WYA1 636 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 INSL6Q9Y581 213 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 PCDHA2Q9Y5H9 948 aa15.65■□□□□ 0.1
SPTLC1-207ENST00000488921 TRANK1O15050 2925 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms