RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PLEKHH3Q7Z736 793 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
COL21A1-211ENST00000488912 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
COL21A1-211ENST00000488912 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
COL21A1-211ENST00000488912 NPHP3-ACAD11A0A0J9YXS1 232 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 P4HBP07237 508 aaKnown RBP12.17□□□□□ -0.46
COL21A1-211ENST00000488912 UGCGQ16739 394 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 CYFIP1Q7L576 1253 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 DACH1Q9UI36 760 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 MGAMO43451 1857 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 ASB14A6NK59 587 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 IDEP14735 1019 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 QARSP47897 775 aaKnown RBP12.17□□□□□ -0.46
COL21A1-211ENST00000488912 RAD51AP2Q09MP3 1159 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 NCAPHQ15003 741 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 PWP2Q15269 919 aaKnown RBP12.17□□□□□ -0.46
COL21A1-211ENST00000488912 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 ARMCX2Q7L311 632 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 NACC1Q96RE7 527 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 PPP1R9BQ96SB3 815 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 ZSWIM4Q9H7M6 989 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 PCDHA10Q9Y5I2 948 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 MYH11P35749 1972 aa12.17□□□□□ -0.46
COL21A1-211ENST00000488912 ARID2Q68CP9 1835 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 AP5Z1O43299 807 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 ARIH2O95376 493 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 ACTR2P61160 394 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 KLHL10Q6JEL2 608 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 DPP9Q86TI2 863 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 MED15Q96RN5 788 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 RUSC1Q9BVN2 902 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 MAPK8IP1Q9UQF2 711 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 ZSWIM8A7E2V4 1837 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 IKBKBO14920 756 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 AOC2O75106 756 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 TGFB3P10600 412 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 MYL5Q02045 173 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 STK4Q13043 487 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 NOGQ13253 232 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
COL21A1-211ENST00000488912 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
COL21A1-211ENST00000488912 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 OFD1O75665 1012 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 FARP2O94887 1054 aaPredicted RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 KRT18P05783 430 aaKnown RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 ERCC5P28715 1186 aaPredicted RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 PRCPP42785 496 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 PSMC5P62195 406 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 EHHADHQ08426 723 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 ANP32BQ92688 251 aaKnown RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 MAML3Q96JK9 1138 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 REEP2Q9BRK0 252 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 SYNRGQ9UMZ2 1314 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 CA12O43570 354 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 LYPLA2O95372 231 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 GGPS1O95749 300 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 APLP1P51693 650 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 COASYQ13057 564 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 GIT2Q14161 759 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 NEDD9Q14511 834 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 MORN1Q5T089 497 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 RINT1Q6NUQ1 792 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 ABHD15Q6UXT9 468 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
COL21A1-211ENST00000488912 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 PANK4Q9NVE7 773 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
COL21A1-211ENST00000488912 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 FRMD3A2A2Y4 597 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms