RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
TRAIP-209ENST00000488860 GLG1Q92896 1179 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 ARMC5Q96C12 935 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 CALML4Q96GE6 196 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 DEFB118Q96PH6 123 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 LXNQ9BS40 222 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
TRAIP-209ENST00000488860 AZI2Q9H6S1 392 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 RGL1Q9NZL6 768 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 KDM3AQ9Y4C1 1321 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 MYH11P35749 1972 aa13.82□□□□□ -0.2
TRAIP-209ENST00000488860 A0A1B0GVL5 298 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 ADAMTS4O75173 837 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 LGALS2P05162 132 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 PFKFB1P16118 471 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 MARK3P27448 753 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 GNASQ5JWF2 1037 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 RNF180Q86T96 592 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 TPH2Q8IWU9 490 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 CKAP2LQ8IYA6 745 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 PDILTQ8N807 584 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 MMTAG2Q9BU76 263 aaKnown RBP13.81□□□□□ -0.2
TRAIP-209ENST00000488860 PAK6Q9NQU5 681 aaPredicted RBP13.81□□□□□ -0.2
TRAIP-209ENST00000488860 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 EMSYQ7Z589 1322 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 IGSF9BQ9UPX0 1349 aa13.81□□□□□ -0.2
TRAIP-209ENST00000488860 SCN10AQ9Y5Y9 1956 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 A6NJR5 290 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 DDX11L8A8MPP1 907 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 ZEB2O60315 1214 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 ATG7O95352 703 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 P4HBP07237 508 aaKnown RBP13.8□□□□□ -0.2
TRAIP-209ENST00000488860 MCM4P33991 863 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 QARSP47897 775 aaKnown RBP13.8□□□□□ -0.2
TRAIP-209ENST00000488860 PSMC5P62195 406 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 UBE2HP62256 183 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 PRKCEQ02156 737 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 LHX8Q68G74 356 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 PDXDC2PQ6P474 469 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 CCSER1Q9C0I3 900 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 GOLPH3LQ9H4A5 285 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
TRAIP-209ENST00000488860 CCDC39Q9UFE4 941 aa13.8□□□□□ -0.2
TRAIP-209ENST00000488860 ZNF215Q9UL58 517 aaPredicted RBP13.8□□□□□ -0.2
TRAIP-209ENST00000488860 CTAGE5O15320 804 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 LGR5O75473 907 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 PLCG1P19174 1290 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 CMA1P23946 247 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 RPA1P27694 616 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 STAT6P42226 847 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 STAT5BP51692 787 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 GRB10Q13322 594 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 LRRC41Q15345 812 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 ECM1Q16610 540 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 CATSPER3Q86XQ3 398 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 DHX58Q96C10 678 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 CCDC43Q96MW1 224 aaKnown RBP13.79□□□□□ -0.2
TRAIP-209ENST00000488860 PNMA5Q96PV4 448 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 PCYT2Q99447 389 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 POLR3CQ9BUI4 534 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-209ENST00000488860 PANK2Q9BZ23 570 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 SMARCAD1Q9H4L7 1026 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 ZSWIM4Q9H7M6 989 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 LMBRD1Q9NUN5 540 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 WRAP73Q9P2S5 460 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-209ENST00000488860 SEPT9Q9UHD8 586 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-209ENST00000488860 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
TRAIP-209ENST00000488860 TRIP12Q14669 1992 aaPredicted RBP13.79□□□□□ -0.2
TRAIP-209ENST00000488860 EVPLQ92817 2033 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 A0A087WWV3 80 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 A0A087X0B3 334 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 IGKV6D-21A0A0A0MT36 114 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 KBTBD13C9JR72 458 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 DKC1O60832 514 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRAIP-209ENST00000488860 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 SLITRK3O94933 977 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 OATP04181 439 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 SPATA31C1P0DKV0 1188 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 CST5P28325 142 aaPredicted RBP13.78□□□□□ -0.2
TRAIP-209ENST00000488860 NDUFA8P51970 172 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 KCNA10Q16322 511 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 TMEM119Q4V9L6 283 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 RRAGBQ5VZM2 374 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 PCSK9Q8NBP7 692 aaKnown RBP13.78□□□□□ -0.2
TRAIP-209ENST00000488860 KLHDC9Q8NEP7 349 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 HSD17B14Q9BPX1 270 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
TRAIP-209ENST00000488860 ERAP1Q9NZ08 941 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms