RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 APBA2Q99767 749 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 PDCD2LQ9BRP1 358 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 ZNF577Q9BSK1 485 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 POLR3CQ9BUI4 534 aaPredicted RBP14.2□□□□□ -0.14
NELFE-209ENST00000488426 TRIM5Q9C035 493 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 ZMYND15Q9H091 742 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 JADE2Q9NQC1 790 aa14.2□□□□□ -0.14
NELFE-209ENST00000488426 ZNFX1Q9P2E3 1918 aaKnown RBP14.19□□□□□ -0.14
NELFE-209ENST00000488426 IPO5O00410 1097 aaKnown RBP14.19□□□□□ -0.14
NELFE-209ENST00000488426 GAS7O60861 476 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 FARP2O94887 1054 aaPredicted RBP14.19□□□□□ -0.14
NELFE-209ENST00000488426 ITGB5P18084 799 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 MCM6Q14566 821 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 ECM1Q16610 540 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 PRAMEF19Q5SWL8 479 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 LHX8Q68G74 356 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 UIMC1Q96RL1 719 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 TEKT3Q9BXF9 490 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 CYP39A1Q9NYL5 469 aa14.19□□□□□ -0.14
NELFE-209ENST00000488426 PVALEFA0A1B0GWK0 134 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 PPP1R3GB7ZBB8 358 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 H0YGN5 161 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 MED24O75448 989 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 PGK2P07205 417 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 HOXC6P09630 235 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 ARP10275 920 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 EIF2AK2P19525 551 aaKnown RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 MUTP22033 750 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 CCND2P30279 289 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 CDC25BP30305 580 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 COPB2P35606 906 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 PPP1R2P41236 205 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 ASIC1P78348 528 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 MRPS9P82933 396 aaKnown RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 KCNK18Q7Z418 384 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 NSUN6Q8TEA1 469 aaKnown RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 EXOC1Q9NV70 894 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 IVNS1ABPQ9Y6Y0 642 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 PFASO15067 1338 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 LCTP09848 1927 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 LOXHD1Q8IVV2 1947 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 MYMKA6NI61 221 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 B3GNT9Q6UX72 402 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 DPP9Q86TI2 863 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 CATSPER3Q86XQ3 398 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 GIMAP8Q8ND71 665 aaPredicted RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 SHCBP1Q8NEM2 672 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 DPF3Q92784 378 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 EIF2AK1Q9BQI3 630 aaKnown RBP14.18□□□□□ -0.14
NELFE-209ENST00000488426 HSD3B7Q9H2F3 369 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 KCNH7Q9NS40 1196 aa14.18□□□□□ -0.14
NELFE-209ENST00000488426 SYNRGQ9UMZ2 1314 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 STAM2O75886 525 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 SPATA31C1P0DKV0 1188 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 STIM1Q13586 685 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 MTMR1Q13613 665 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 UNC13DQ70J99 1090 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.17□□□□□ -0.14
NELFE-209ENST00000488426 NEK9Q8TD19 979 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 AGO4Q9HCK5 861 aaKnown RBP14.17□□□□□ -0.14
NELFE-209ENST00000488426 OGDHLQ9ULD0 1010 aa14.17□□□□□ -0.14
NELFE-209ENST00000488426 EML1O00423 815 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 MAFGO15525 162 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 STRNO43815 780 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 SLC25A27O95847 323 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
NELFE-209ENST00000488426 PLA2G4BP0C869 781 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 DHX8Q14562 1220 aaKnown RBP14.16□□□□□ -0.14
NELFE-209ENST00000488426 COBLL1Q53SF7 1204 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 SPATA1Q5VX52 437 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 SMYD4Q8IYR2 804 aaPredicted RBP14.16□□□□□ -0.14
NELFE-209ENST00000488426 DNERQ8NFT8 737 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 GPRASP2Q96D09 838 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 MROH8Q9H579 483 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
NELFE-209ENST00000488426 TBC1D22BQ9NU19 505 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 RWDD2AQ9UIY3 292 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 DNM3Q9UQ16 869 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 NFE2L3Q9Y4A8 694 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 TRIOBPQ9H2D6 2365 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 E9PMD0 336 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 NR3C2P08235 984 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 MYCLP12524 364 aaPredicted RBP14.16□□□□□ -0.14
NELFE-209ENST00000488426 PDE4DQ08499 809 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 PAK1Q13153 545 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 EPHA7Q15375 998 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 ADSSL1Q8N142 457 aa14.16□□□□□ -0.14
NELFE-209ENST00000488426 DDX12PQ92771 950 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms