RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 IL17RAQ96F46 866 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 UBE2ZQ9H832 354 aaPredicted RBP12.84□□□□□ -0.35
VAMP7-206ENST00000488344 RIC8AQ9NPQ8 531 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 SQORQ9Y6N5 450 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 NFASCO94856 1347 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 CNTNAP5Q8WYK1 1306 aa12.84□□□□□ -0.35
VAMP7-206ENST00000488344 GSTTP1A0A1W2PQM5 241 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 H3BNC9 293 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 UPP2O95045 317 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 GHRP10912 638 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 COL9A1P20849 921 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 MARK3P27448 753 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 SLC26A2P50443 739 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 PUS10Q3MIT2 529 aaKnown RBP12.83□□□□□ -0.36
VAMP7-206ENST00000488344 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 TMEM192Q8IY95 271 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 FIBCD1Q8N539 461 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 CCDC12Q8WUD4 166 aaPredicted RBP12.83□□□□□ -0.36
VAMP7-206ENST00000488344 C11orf84Q9BUA3 381 aaPredicted RBP12.83□□□□□ -0.36
VAMP7-206ENST00000488344 FTHL17Q9BXU8 183 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 PKD2L1Q9P0L9 805 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 FAM50BQ9Y247 325 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 TRANK1O15050 2925 aa12.83□□□□□ -0.36
VAMP7-206ENST00000488344 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.82□□□□□ -0.36
VAMP7-206ENST00000488344 NCK2O43639 380 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 CDC45O75419 566 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 CHRNA1P02708 482 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 RB1P06400 928 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
VAMP7-206ENST00000488344 EXOSC10Q01780 885 aaKnown RBP12.82□□□□□ -0.36
VAMP7-206ENST00000488344 GPM6BQ13491 265 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 CEP55Q53EZ4 464 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 RUFY4Q6ZNE9 571 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 NIPA1Q7RTP0 329 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 PLPPR4Q7Z2D5 763 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 NECAB3Q96P71 396 aaPredicted RBP12.82□□□□□ -0.36
VAMP7-206ENST00000488344 LMAN2LQ9H0V9 348 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 BARHL2Q9NY43 387 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 TCEAL9Q9UHQ7 104 aa12.82□□□□□ -0.36
VAMP7-206ENST00000488344 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
VAMP7-206ENST00000488344 INSRRP14616 1297 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 CTNNB1P35222 781 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 ZNF76P36508 570 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 SREBF1P36956 1147 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 STAT5BP51692 787 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 ACTR2P61160 394 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 IGBP1P78318 339 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 MGAT3Q09327 533 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 LPIN1Q14693 890 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 LEXMQ3ZCV2 418 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 FBXO47Q5MNV8 452 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 ODR4Q5SWX8 454 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 NME8Q8N427 588 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 DNAJB3Q8WWF6 145 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 NSUN3Q9H649 340 aaKnown RBP12.81□□□□□ -0.36
VAMP7-206ENST00000488344 TRPV2Q9Y5S1 764 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 CDY2AQ9Y6F7 541 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
VAMP7-206ENST00000488344 MYO9BQ13459 2157 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 ADGRA3Q8IWK6 1321 aa12.81□□□□□ -0.36
VAMP7-206ENST00000488344 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 PRRC2BQ5JSZ5 2229 aaKnown RBP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 C5orf67F2Z3F1 127 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 STXBP3O00186 592 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 STAG3L1P0CL83 205 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 C7P10643 843 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 KCNA5P22460 613 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 SETQ01105 290 aaPredicted RBP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 FUT2Q10981 343 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 MARCH8Q5T0T0 291 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 TELO2Q9Y4R8 837 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
VAMP7-206ENST00000488344 TRIP12Q14669 1992 aaPredicted RBP12.8□□□□□ -0.36
VAMP7-206ENST00000488344 SMIM35A0A1B0GVV1 85 aa12.79□□□□□ -0.36
VAMP7-206ENST00000488344 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
VAMP7-206ENST00000488344 MEIS1O00470 390 aa12.79□□□□□ -0.36
VAMP7-206ENST00000488344 BACH1O14867 736 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms