RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 CFAP100Q494V2 611 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 COBLL1Q53SF7 1204 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 TRIM68Q6AZZ1 485 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 TUBA1AQ71U36 451 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 APTXQ7Z2E3 356 aaKnown RBP6.9□□□□□ -1.3
SIK3-212ENST00000488337 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 WDR75Q8IWA0 830 aaKnown RBP6.9□□□□□ -1.3
SIK3-212ENST00000488337 FSIP1Q8NA03 581 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 DYDC1Q8WWB3 177 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 SIKE1Q9BRV8 207 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 C19orf44Q9H6X5 657 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 PSTPIP2Q9H939 334 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 POLD4Q9HCU8 107 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 SNX9Q9Y5X1 595 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 ANKRD26Q9UPS8 1709 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 IGSF1Q8N6C5 1336 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 DYTNA2CJ06 578 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 MAGEA13PA6NCF6 341 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 JAK2O60674 1132 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 ALDH1L1O75891 902 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 POTEJP0CG39 1038 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 LIFRP42702 1097 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 OCRLQ01968 901 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 CWF19L2Q2TBE0 894 aaKnown RBP6.9□□□□□ -1.3
SIK3-212ENST00000488337 TMEM259Q4ZIN3 620 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 LIN52Q52LA3 116 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 PHLDB3Q6NSJ2 640 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 PPP1R10Q96QC0 940 aaKnown RBP6.9□□□□□ -1.3
SIK3-212ENST00000488337 DPH5Q9H2P9 285 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 SCOCQ9UIL1 159 aa6.9□□□□□ -1.3
SIK3-212ENST00000488337 ERVV-2B6SEH9 535 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 E9PBE3 544 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 CYTH3O43739 400 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 LMNB1P20700 586 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 LMOD1P29536 600 aaPredicted RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 CASP14P31944 242 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 SERPINB4P48594 390 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 ADKP55263 362 aaKnown RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 RELAQ04206 551 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 STK38Q15208 465 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 BBS5Q8N3I7 341 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 RBBP8NLQ8NC74 664 aaPredicted RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 STK32AQ8WU08 396 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 SDCCAG3Q96C92 435 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 GSDMAQ96QA5 445 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 LRRC2Q9BYS8 371 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 SEMA4AQ9H3S1 761 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 ZNHIT2Q9UHR6 403 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 NOSIPQ9Y314 301 aaKnown RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 A0A1W2PQ27 194 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 A0A1W2PQ64 194 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 A0A1W2PQD8 194 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 GRM8O00222 908 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.31
SIK3-212ENST00000488337 SPTLC2O15270 562 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 TEX28O15482 410 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 RASA1P20936 1047 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 ADARP55265 1226 aaKnown RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 NDUFA5Q16718 116 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 CCDC152Q4G0S7 254 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 ERMARDQ5T6L9 678 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 ARHGEF18Q6ZSZ5 1173 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 TTC5Q8N0Z6 440 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 VPS37AQ8NEZ2 397 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 EAF2Q96CJ1 260 aaPredicted RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 PBKQ96KB5 322 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 FBXL18Q96ME1 805 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 ZMAT2Q96NC0 199 aaKnown RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 CCDC134Q9H6E4 229 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 CYP39A1Q9NYL5 469 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 CNOT8Q9UFF9 292 aaKnown RBP6.9□□□□□ -1.31
SIK3-212ENST00000488337 CPS1P31327 1500 aa6.9□□□□□ -1.31
SIK3-212ENST00000488337 SPATA31D1Q6ZQQ2 1576 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 CLTCQ00610 1675 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 CPLX1O14810 134 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 HOXB7P09629 217 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 GTF2H1P32780 548 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 PTDSS1P48651 473 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 KIF23Q02241 960 aaPredicted RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 HSPA14Q0VDF9 509 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 GSTA3Q16772 222 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 CFAP58Q5T655 872 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 GRAMD4Q6IC98 578 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 KSR2Q6VAB6 950 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 MIGA2Q7L4E1 593 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 RNF10Q8N5U6 811 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 ACMSDQ8TDX5 336 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 NAT14Q8WUY8 206 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 DNAJC9Q8WXX5 260 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 STARD8Q92502 1023 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 LRRC59Q96AG4 307 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 XPO6Q96QU8 1125 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 PARVGQ9HBI0 331 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 PPANQ9NQ55 473 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 DMGDHQ9UI17 866 aaKnown RBP6.89□□□□□ -1.31
SIK3-212ENST00000488337 TLL2Q9Y6L7 1015 aa6.89□□□□□ -1.31
SIK3-212ENST00000488337 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms