RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 WRAP73Q9P2S5 460 aaPredicted RBP19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 NOL7Q9UMY1 257 aaKnown RBP19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 SAMM50Q9Y512 469 aa19.35■□□□□ 0.69
SHROOM1-205ENST00000488072 POTEMA6NI47 508 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 PDCP20941 246 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 STAT5BP51692 787 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 IGBP1P78318 339 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 MIS18BP1Q6P0N0 1132 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 C7orf31Q8N865 590 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 DHX38Q92620 1227 aaKnown RBP19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 SH2D3AQ9BRG2 576 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 ZNF302Q9NR11 478 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 GTF2IRD1Q9UHL9 959 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 ZDHHC9Q9Y397 364 aa19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 TNRC18O15417 2968 aaPredicted RBP19.34■□□□□ 0.69
SHROOM1-205ENST00000488072 EMSYQ7Z589 1322 aa19.33■□□□□ 0.69
SHROOM1-205ENST00000488072 WDR64B1ANS9 1081 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 TREHO43280 583 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 CLTBP09497 229 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 PTGDRQ13258 359 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 PDXDC2PQ6P474 469 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 NFRKBQ6P4R8 1299 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 FAM20AQ96MK3 541 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 NAP1L4Q99733 375 aaKnown RBP19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 PPP1R12CQ9BZL4 782 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 SMARCAD1Q9H4L7 1026 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 TTC12Q9H892 705 aaPredicted RBP19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 TMEM39AQ9NV64 488 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 TBX21Q9UL17 535 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 PCDHA10Q9Y5I2 948 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 CLIC4Q9Y696 253 aa19.33■□□□□ 0.68
SHROOM1-205ENST00000488072 DCDC2CA8MYV0 355 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 ZBTB39O15060 712 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 TBX3O15119 743 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 STBD1O95210 358 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 PSAPP07602 524 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 OR52Z1P0C646 297 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 INSRRP14616 1297 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 TECP42680 631 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 TRAPPC10P48553 1259 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 CEBPZQ03701 1054 aaKnown RBP19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 PPP2R5CQ13362 524 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 CTTNQ14247 550 aaKnown RBP19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 PTGISQ16647 500 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 DYDC2Q96IM9 177 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 AZI2Q9H6S1 392 aa19.32■□□□□ 0.68
SHROOM1-205ENST00000488072 DNAH12Q6ZR08 3092 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 PP2D1A8MPX8 630 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 BAG4O95429 457 aaKnown RBP19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 CYP2C18P33260 490 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 MDM2Q00987 491 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 GRIN1Q05586 938 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 MARCH8Q5T0T0 291 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 RUFY4Q6ZNE9 571 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 PLPPR4Q7Z2D5 763 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 SMAP1Q8IYB5 467 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 LMBR1Q8WVP7 490 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 TOX2Q96NM4 488 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 KATNAL1Q9BW62 490 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 ERAP1Q9NZ08 941 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 TCEAL9Q9UHQ7 104 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 PCDHA12Q9UN75 941 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 TRPC6Q9Y210 931 aa19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 MAFBQ9Y5Q3 323 aaPredicted RBP19.31■□□□□ 0.68
SHROOM1-205ENST00000488072 IGSF9BQ9UPX0 1349 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 C17orf102A2RUQ5 167 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 ZBTB42B2RXF5 422 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 CDC25AP30304 524 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 JAK3P52333 1124 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 CCL23P55773 120 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 PPFIA1Q13136 1202 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 BECN1Q14457 450 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 SF3A1Q15459 793 aaKnown RBP19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 GRIK4Q16099 956 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 RILPL1Q5EBL4 403 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 SESTD1Q86VW0 696 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 SLFN12Q8IYM2 578 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 ZNF579Q8NAF0 562 aaKnown RBP19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 AFAP1L1Q8TED9 768 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 BADQ92934 168 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 USP28Q96RU2 1077 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 OSBPL7Q9BZF2 842 aa19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 TFIP11Q9UBB9 837 aaKnown RBP19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 ZNF215Q9UL58 517 aaPredicted RBP19.3■□□□□ 0.68
SHROOM1-205ENST00000488072 POTEB3A0JP26 581 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 HOXC8P31273 242 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 ADAM17P78536 824 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 PRKCEQ02156 737 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 EPHA7Q15375 998 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 ECM1Q16610 540 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 FAM160B1Q5W0V3 765 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 POTEBQ6S5H4 581 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 BRAPQ7Z569 592 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 CKAP2LQ8IYA6 745 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 ATP8B4Q8TF62 1192 aa19.29■□□□□ 0.68
SHROOM1-205ENST00000488072 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms