RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 BAIAP3O94812 1187 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 CTDNEP1O95476 244 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 CXCL10P02778 98 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 XBP1P17861 261 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 ADAM17P78536 824 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 MBTPS1Q14703 1052 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 DAGLBQ8NCG7 672 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 MYLIPQ8WY64 445 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 SLC9A7Q96T83 725 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 TBC1D22BQ9NU19 505 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 TUBE1Q9UJT0 475 aa26.91■■□□□ 1.9
RNF38-208ENST00000488058 DHX15O43143 795 aaKnown RBP26.9■■□□□ 1.9
RNF38-208ENST00000488058 PLCB4Q15147 1175 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 FAM160B1Q5W0V3 765 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 GALNT17Q6IS24 598 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 RUFY4Q6ZNE9 571 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 PLPPR4Q7Z2D5 763 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 FAM177A1Q8N128 213 aaPredicted RBP26.9■■□□□ 1.9
RNF38-208ENST00000488058 GTF3C6Q969F1 213 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 GJB4Q9NTQ9 266 aa26.9■■□□□ 1.9
RNF38-208ENST00000488058 YBX2Q9Y2T7 364 aaKnown RBP26.9■■□□□ 1.9
RNF38-208ENST00000488058 CAND2O75155 1236 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 ATG7O95352 703 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 INSRRP14616 1297 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 MYOGP15173 224 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 USP11P51784 963 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 NPY5RQ15761 445 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 TCTN1Q2MV58 587 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 MIS18BP1Q6P0N0 1132 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 WASF1Q92558 559 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 TNPO1Q92973 898 aaKnown RBP26.89■■□□□ 1.9
RNF38-208ENST00000488058 PHF20Q9BVI0 1012 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 ZNF302Q9NR11 478 aa26.89■■□□□ 1.9
RNF38-208ENST00000488058 GRIN2CQ14957 1233 aa26.88■■□□□ 1.89
RNF38-208ENST00000488058 NONOQ15233 471 aaKnown RBP eCLIP26.88■■□□□ 1.89
RNF38-208ENST00000488058 ABHD15Q6UXT9 468 aa26.88■■□□□ 1.89
RNF38-208ENST00000488058 CCDC60Q8IWA6 550 aaPredicted RBP26.88■■□□□ 1.89
RNF38-208ENST00000488058 LENG9Q96B70 501 aa26.88■■□□□ 1.89
RNF38-208ENST00000488058 ZBTB10Q96DT7 871 aa26.88■■□□□ 1.89
RNF38-208ENST00000488058 SLC28A3Q9HAS3 691 aa26.88■■□□□ 1.89
RNF38-208ENST00000488058 PTPRSQ13332 1948 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 LAMA2P24043 3122 aaKnown RBP26.87■■□□□ 1.89
RNF38-208ENST00000488058 POTEB3A0JP26 581 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 RRN3P2A6NIE6 340 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 M0R2N6 131 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 EDIL3O43854 480 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 TDP2O95551 362 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 WDR5P61964 334 aaKnown RBP26.87■■□□□ 1.89
RNF38-208ENST00000488058 KRT76Q01546 638 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 IKBKEQ14164 716 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 SWSAP1Q6NVH7 229 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 TAF2Q6P1X5 1199 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 POTEBQ6S5H4 581 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 KRT25Q7Z3Z0 450 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 TRAPPC12Q8WVT3 735 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 SAMM50Q9Y512 469 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 PCDHA11Q9Y5I1 949 aa26.87■■□□□ 1.89
RNF38-208ENST00000488058 IGKV6D-21A0A0A0MT36 114 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 CCDC194A0A1B0GVG4 234 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 MSH4O15457 936 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 INF2Q27J81 1249 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 MARCH8Q5T0T0 291 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 ZNF746Q6NUN9 644 aaPredicted RBP26.86■■□□□ 1.89
RNF38-208ENST00000488058 PDXDC2PQ6P474 469 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 RSPH3Q86UC2 560 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 CKAP2LQ8IYA6 745 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 DBF4BQ8NFT6 615 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 PHOSPHO2Q8TCD6 241 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 DNAJB3Q8WWF6 145 aa26.86■■□□□ 1.89
RNF38-208ENST00000488058 FAM49AQ9H0Q0 323 aaPredicted RBP26.86■■□□□ 1.89
RNF38-208ENST00000488058 ABHD14A-ACY1A0A1B0GW23 586 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 FOSL2P15408 326 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 SLC26A2P50443 739 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 FOSBP53539 338 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 DEFB103AP81534 67 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 PPP2R2DQ66LE6 453 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 TRMT1LQ7Z2T5 733 aaKnown RBP26.85■■□□□ 1.89
RNF38-208ENST00000488058 TMCO2Q7Z6W1 182 aaPredicted RBP26.85■■□□□ 1.89
RNF38-208ENST00000488058 HERC6Q8IVU3 1022 aa26.85■■□□□ 1.89
RNF38-208ENST00000488058 MYH9P35579 1960 aaKnown RBP26.84■■□□□ 1.89
RNF38-208ENST00000488058 MBLAC1A4D2B0 266 aaPredicted RBP26.84■■□□□ 1.89
RNF38-208ENST00000488058 CHMP2AO43633 222 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 GAS7O60861 476 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 PSAPP07602 524 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 FDPSP14324 419 aaKnown RBP26.84■■□□□ 1.89
RNF38-208ENST00000488058 SMAP1Q8IYB5 467 aaPredicted RBP26.84■■□□□ 1.89
RNF38-208ENST00000488058 NSUN7Q8NE18 718 aaKnown RBP26.84■■□□□ 1.89
RNF38-208ENST00000488058 SEPT8Q92599 483 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 GJA10Q969M2 543 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 TEKT3Q9BXF9 490 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 OSBPL7Q9BZF2 842 aa26.84■■□□□ 1.89
RNF38-208ENST00000488058 KIF28PB7ZC32 967 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 JAK2O60674 1132 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 EFCAB14O75071 495 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 LETM2Q2VYF4 491 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 Q4G0T1 1027 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 PLEKHG4Q58EX7 1191 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 FAM26DQ5JW98 314 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 LRCH2Q5VUJ6 765 aa26.83■■□□□ 1.89
RNF38-208ENST00000488058 OXER1Q8TDS5 423 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms