RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SF1Q15637 639 aaKnown RBP5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 TAX1BP1Q86VP1 789 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 ZNF227Q86WZ6 799 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 SYNPOQ8N3V7 929 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 SH3TC2Q8TF17 1288 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 APPBP2Q92624 585 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 EXTL1Q92935 676 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 SLC4A7Q9Y6M7 1214 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 CDC45O75419 566 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 CPP00450 1065 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 ITGAVP06756 1048 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 HOXC12P31275 282 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 CSF2RBP32927 897 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 LTBRP36941 435 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 GLRBP48167 497 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 PTH1RQ03431 593 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 SDE2Q6IQ49 451 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 DTX3Q8N9I9 347 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 KREMEN2Q8NCW0 462 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 TRIM8Q9BZR9 551 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 IKZF4Q9H2S9 585 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 DLL4Q9NR61 685 aa5.45□□□□□ -1.54
HMGB1P36-201ENST00000487709 COMTP21964 271 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 ACBD5Q5T8D3 534 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 SPATC1Q76KD6 591 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 ZBTB38Q8NAP3 1195 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 PHOSPHO1Q8TCT1 267 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 KCTD13Q8WZ19 329 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 CEP89Q96ST8 783 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 TMX1Q9H3N1 280 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 SMOC1Q9H4F8 434 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 ASH2LQ9UBL3 628 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 ZFP69BQ9UJL9 534 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 PTPN22Q9Y2R2 807 aa5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 MRPL42Q9Y6G3 142 aaKnown RBP5.44□□□□□ -1.54
HMGB1P36-201ENST00000487709 A0A1W2PQU0 124 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 SLC27A2O14975 620 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 NARSO43776 548 aaKnown RBP5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 MAFKO60675 156 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 KNG1P01042 644 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 FGFR1P11362 822 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 MCM7P33993 719 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 PPP2R2AP63151 447 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 SUMO1P63165 101 aaKnown RBP5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 TCEA2Q15560 299 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 SKIDA1Q1XH10 827 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 LSM12Q3MHD2 195 aaKnown RBP5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 ZNF568Q3ZCX4 644 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 GIMAP6Q6P9H5 292 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 SCUBE1Q8IWY4 988 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 RBM12BQ8IXT5 1001 aaKnown RBP5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 FUKQ8N0W3 1084 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 STPG3Q8N7X2 389 aa5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 NEIL1Q96FI4 390 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P36-201ENST00000487709 KRIT1O00522 736 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 DIAPH1O60610 1272 aaKnown RBP5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 SCG5P05408 212 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 CKMP06732 381 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 ZNF888P0CJ79 500 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 NAT1P18440 290 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 HSD3B2P26439 372 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 AGBL4Q5VU57 503 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 DENND5AQ6IQ26 1287 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 NSMFQ6X4W1 530 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 PIP4K2CQ8TBX8 421 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 NEU4Q8WWR8 484 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 AJUBAQ96IF1 538 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 IER2Q9BTL4 223 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 JAM3Q9BX67 310 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 TBX22Q9Y458 520 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 PTCH2Q9Y6C5 1203 aa5.42□□□□□ -1.54
HMGB1P36-201ENST00000487709 TRBV23-1A0A0A0MS06 115 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 ENPP3O14638 875 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 PRODHO43272 600 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 NCLP19338 710 aaKnown RBP5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 ACO1P21399 889 aaKnown RBP5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 MAP4K2Q12851 820 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 USP10Q14694 798 aaKnown RBP5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 C16orf86Q6ZW13 317 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 JAZF1Q86VZ6 243 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 ZNF575Q86XF7 245 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 TRIM48Q8IWZ4 208 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 TMEM145Q8NBT3 493 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 TTLL11Q8NHH1 800 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 CLEC4DQ8WXI8 215 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 EDAQ92838 391 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 FANCLQ9NW38 375 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 TMEM260Q9NX78 707 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 HSPBP1Q9NZL4 362 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 ARHGAP20Q9P2F6 1191 aa5.41□□□□□ -1.54
HMGB1P36-201ENST00000487709 LTFP02788 710 aa5.4□□□□□ -1.54
HMGB1P36-201ENST00000487709 CHGBP05060 677 aa5.4□□□□□ -1.54
HMGB1P36-201ENST00000487709 C1SP09871 688 aa5.4□□□□□ -1.54
HMGB1P36-201ENST00000487709 GFRA1P56159 465 aa5.4□□□□□ -1.54
HMGB1P36-201ENST00000487709 NANOS3P60323 173 aaKnown RBP5.4□□□□□ -1.54
HMGB1P36-201ENST00000487709 RAC3P60763 192 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms