RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SEC63Q9UGP8 760 aaKnown RBP22.36■■□□□ 1.17
SMPDL3A-202ENST00000487215 TBX10O75333 385 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 DGKIO75912 1065 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 DDAH1O94760 285 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 KIF5BP33176 963 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 GLG1Q92896 1179 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 UPF3BQ9BZI7 483 aaKnown RBP22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 AGO3Q9H9G7 860 aaKnown RBP22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 LY9Q9HBG7 655 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 PKD2L1Q9P0L9 805 aa22.35■■□□□ 1.17
SMPDL3A-202ENST00000487215 LINC01565O15544 149 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 PLEKHA8P1O95397 391 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 SMARCA1P28370 1054 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 SMAD4Q13485 552 aaKnown RBP22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 CAMK1Q14012 370 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 ZBTB10Q96DT7 871 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 POP1Q99575 1024 aaKnown RBP22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 PLVAPQ9BX97 442 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 SMARCAD1Q9H4L7 1026 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 IGFLR1Q9H665 355 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 ALG13Q9NP73 1137 aaKnown RBP22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 UBIAD1Q9Y5Z9 338 aa22.34■■□□□ 1.17
SMPDL3A-202ENST00000487215 CD52P31358 61 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 IGBP1P78318 339 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 MRPS6P82932 125 aaKnown RBP22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 MTMR1Q13613 665 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 SRBD1Q8N5C6 995 aaKnown RBP22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 FBXL18Q96ME1 805 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 LZTS2Q9BRK4 669 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 PSTPIP2Q9H939 334 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 PLAGL2Q9UPG8 496 aa22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 MRPL42Q9Y6G3 142 aaKnown RBP22.33■■□□□ 1.17
SMPDL3A-202ENST00000487215 MYO7AQ13402 2215 aa22.33■■□□□ 1.16
SMPDL3A-202ENST00000487215 SGSM2O43147 1006 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 NHLH1Q02575 133 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 UBE2SQ16763 222 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 HFE2Q6ZVN8 426 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 P2RX5Q93086 422 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 FAM49AQ9H0Q0 323 aaPredicted RBP22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 KCNH6Q9H252 994 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 MUTYHQ9UIF7 546 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 CD207Q9UJ71 328 aa22.32■■□□□ 1.16
SMPDL3A-202ENST00000487215 TTC3P53804 2025 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 PIEZO1Q92508 2521 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 INSRRP14616 1297 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 MRE11P49959 708 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 GNAQP50148 359 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 ADAM15Q13444 863 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 RTN4RL1Q86UN2 441 aaPredicted RBP22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 CMTR2Q8IYT2 770 aaKnown RBP22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 CMTR1Q8N1G2 835 aaKnown RBP22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 CRIPAKQ8N1N5 446 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 PCYT2Q99447 389 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 KAT6AQ92794 2004 aa22.31■■□□□ 1.16
SMPDL3A-202ENST00000487215 RRN3P2A6NIE6 340 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 STXBP3O00186 592 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 RPLP2P05387 115 aaKnown RBP22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 DNAJB1P25685 340 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 HERC4Q5GLZ8 1057 aaPredicted RBP22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 IER5Q5VY09 327 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 RNF135Q8IUD6 432 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 NPAS4Q8IUM7 802 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 MAP4K1Q92918 833 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 FTHL17Q9BXU8 183 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 JADE2Q9NQC1 790 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 TRPV2Q9Y5S1 764 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 RBM8AQ9Y5S9 174 aaKnown RBP22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 SQORQ9Y6N5 450 aa22.3■■□□□ 1.16
SMPDL3A-202ENST00000487215 SPDYE3A6NKU9 549 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 PRC1O43663 620 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 ITGB1P05556 798 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 RXRAP19793 462 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 NDUFV1P49821 464 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 NAALADL2Q58DX5 795 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 CASC1Q6TDU7 716 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 ADGRD2Q7Z7M1 963 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 SPPL3Q8TCT6 385 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 MSLNLQ96KJ4 702 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 MTA3Q9BTC8 594 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 JPH1Q9HDC5 661 aaPredicted RBP22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 PCDHA6Q9UN73 950 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 PCDHA8Q9Y5H6 950 aa22.29■■□□□ 1.16
SMPDL3A-202ENST00000487215 hCG_1642624A0A1W2PR95 340 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 SH2B2O14492 632 aaPredicted RBP22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 MAFGO15525 162 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 TMEM62Q0P6H9 643 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 PAN2Q504Q3 1202 aaKnown RBP22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 NFXL1Q6ZNB6 911 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 KLHL23Q8NBE8 558 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 PPP2R3CQ969Q6 453 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 PADI3Q9ULW8 664 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 TRPC6Q9Y210 931 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 KIAA1671Q9BY89 1806 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 C5orf42Q9H799 3197 aa22.28■■□□□ 1.16
SMPDL3A-202ENST00000487215 CCDC69A6NI79 296 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 M0QZ92 97 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 EYA4O95677 639 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 COL9A3Q14050 684 aaPredicted RBP22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 TRAPPC12Q8WVT3 735 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 POF1BQ8WVV4 589 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms