RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 EP400NLQ6ZTU2 488 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 OTOP1Q7RTM1 612 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 LRRC56Q8IYG6 542 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-216ENST00000487043 TTC8Q8TAM2 541 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 KIRREL1Q96J84 757 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 SCYL1Q96KG9 808 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 PSMD1Q99460 953 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 RHOBTB2Q9BYZ6 727 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 TOMM22Q9NS69 142 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 COA3Q9Y2R0 106 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-216ENST00000487043 RWDD3Q9Y3V2 267 aa5.25□□□□□ -1.57
PTCD3-216ENST00000487043 CTTNBP2Q8WZ74 1663 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 KIAA0586Q9BVV6 1533 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 TCRBV5S4A2TA0A5A2 114 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 K7ESF4 209 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 SCDO00767 359 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 NKRFO15226 690 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 PRPF3O43395 683 aaKnown RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 ABLIM3O94929 683 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 ZBTB48P10074 688 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 CEBPAP49715 358 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 SCAND1P57086 179 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 RGL3Q3MIN7 710 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 MAP9Q49MG5 647 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 FAM102BQ5T8I3 360 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 FSTL4Q6MZW2 842 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 PRR23BQ6ZRT6 265 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 OTOP3Q7RTS5 596 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 PNMA8AQ86V59 439 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 CMIPQ8IY22 773 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 TCEAL8Q8IYN2 117 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 KIAA1958Q8N8K9 716 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 PIP4K2CQ8TBX8 421 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 USP33Q8TEY7 942 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 JMJD8Q96S16 334 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 ELF4Q99607 663 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 EPB41L1Q9H4G0 881 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 PCIF1Q9H4Z3 704 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 CARS2Q9HA77 564 aaKnown RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 ZNF281Q9Y2X9 895 aa5.24□□□□□ -1.57
PTCD3-216ENST00000487043 NOC2LQ9Y3T9 749 aaKnown RBP5.24□□□□□ -1.57
PTCD3-216ENST00000487043 NUP160Q12769 1436 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 A0A1W2PQ27 194 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 A0A1W2PQ64 194 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 A0A1W2PQC6 194 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 A0A1W2PQD8 194 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 GOLGA6BA6NDN3 693 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 FADS2P1A8MWK0 482 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-216ENST00000487043 NFIBO00712 420 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 DVL2O14641 736 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 TPD52L2O43399 206 aaKnown RBP5.23□□□□□ -1.57
PTCD3-216ENST00000487043 HIP1RO75146 1068 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 CAND2O75155 1236 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 RFPL1O75677 317 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 DGKIO75912 1065 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 KIF11P52732 1056 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 TCIRG1Q13488 830 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 TERF2Q15554 542 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 INAVAQ3KP66 663 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 CPZQ66K79 652 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 HHIPL2Q6UWX4 724 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 CERS3Q8IU89 383 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 TPH2Q8IWU9 490 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 C1orf162Q8NEQ5 155 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-216ENST00000487043 FAXDC2Q96IV6 333 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 MAP6Q96JE9 813 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 HHIPL1Q96JK4 782 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 CAMKK2Q96RR4 588 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 MS4A5Q9H3V2 200 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 GOLGA6AQ9NYA3 693 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 LMCD1Q9NZU5 365 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 TNFRSF10DQ9UBN6 386 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 ZNF652Q9Y2D9 606 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 SPO11Q9Y5K1 396 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 X6R8D5 127 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 ARHGAP35Q9NRY4 1499 aa5.23□□□□□ -1.57
PTCD3-216ENST00000487043 IQGAP2Q13576 1575 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 LCHNA4D1U4 455 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 GOLGA8AA7E2F4 631 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 GOLGA8BA8MQT2 603 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 MAN2B1O00754 1011 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 USP2O75604 605 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-216ENST00000487043 CFBP00751 764 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 KRT18P05783 430 aaKnown RBP5.22□□□□□ -1.57
PTCD3-216ENST00000487043 ZSCAN22P10073 491 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-216ENST00000487043 LSP1P33241 339 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 NXNQ6DKJ4 435 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 CCSAPQ6IQ19 270 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-216ENST00000487043 SLC4A10Q6U841 1118 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 CILP2Q8IUL8 1156 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 NOSTRINQ8IVI9 506 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 Q8N1Y9 231 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 LZTR1Q8N653 840 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 MAGEB6Q8N7X4 407 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 PLEKHO2Q8TD55 490 aa5.22□□□□□ -1.57
PTCD3-216ENST00000487043 SH3RF2Q8TEC5 729 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms