RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 GUCY1B3Q02153 619 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 PPFIA1Q13136 1202 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 LRIT3Q3SXY7 679 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 FAM160B1Q5W0V3 765 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 PSRC1Q6PGN9 363 aaPredicted RBP20.59■□□□□ 0.89
COL1A1-207ENST00000486572 AFAP1L1Q8TED9 768 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 LMBR1Q8WVP7 490 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 TEKT3Q9BXF9 490 aa20.59■□□□□ 0.89
COL1A1-207ENST00000486572 WDR64B1ANS9 1081 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 TREHO43280 583 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 CCNT1O60563 726 aaKnown RBP20.58■□□□□ 0.89
COL1A1-207ENST00000486572 IQCF3P0C7M6 154 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 FXR1P51114 621 aaKnown RBP eCLIP20.58■□□□□ 0.89
COL1A1-207ENST00000486572 C16orf59Q7L2K0 433 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 CCDC60Q8IWA6 550 aaPredicted RBP20.58■□□□□ 0.89
COL1A1-207ENST00000486572 FBXO18Q8NFZ0 1043 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 ETNPPLQ8TBG4 499 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.58■□□□□ 0.89
COL1A1-207ENST00000486572 ZNF302Q9NR11 478 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 TRPC6Q9Y210 931 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 KIF3AQ9Y496 699 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 PCDHA10Q9Y5I2 948 aa20.58■□□□□ 0.89
COL1A1-207ENST00000486572 PSMD10O75832 226 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 PSAPP07602 524 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 ACRP10323 421 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 CKBP12277 381 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 SELPP16109 830 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 RFC2P35250 354 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 ADAM17P78536 824 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 GRIK4Q16099 956 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 TRIM71Q2Q1W2 868 aaKnown RBP20.57■□□□□ 0.88
COL1A1-207ENST00000486572 LRRC8DQ7L1W4 858 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 TNPO1Q92973 898 aaKnown RBP20.57■□□□□ 0.88
COL1A1-207ENST00000486572 WNT8BQ93098 351 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 GJA10Q969M2 543 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 RNPC3Q96LT9 517 aaKnown RBP20.57■□□□□ 0.88
COL1A1-207ENST00000486572 SAMM50Q9Y512 469 aa20.57■□□□□ 0.88
COL1A1-207ENST00000486572 CHMP2AO43633 222 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 PFKMP08237 780 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 SFNP31947 248 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 JAK3P52333 1124 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 PLCB4Q15147 1175 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 TMEM240Q5SV17 173 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 SWSAP1Q6NVH7 229 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 PDXDC2PQ6P474 469 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 RPUSD2Q8IZ73 545 aaKnown RBP20.56■□□□□ 0.88
COL1A1-207ENST00000486572 UNC45AQ9H3U1 944 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 KCNMB3Q9NPA1 279 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 DISC1Q9NRI5 854 aa20.56■□□□□ 0.88
COL1A1-207ENST00000486572 POTEB3A0JP26 581 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 RRN3P2A6NIE6 340 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 TBX3O15119 743 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 INSRRP14616 1297 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 POTEBQ6S5H4 581 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 FAM20AQ96MK3 541 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 FOXP1Q9H334 677 aaPredicted RBP20.55■□□□□ 0.88
COL1A1-207ENST00000486572 TUBE1Q9UJT0 475 aa20.55■□□□□ 0.88
COL1A1-207ENST00000486572 MAFBQ9Y5Q3 323 aaPredicted RBP20.55■□□□□ 0.88
COL1A1-207ENST00000486572 TRIP12Q14669 1992 aaPredicted RBP20.55■□□□□ 0.88
COL1A1-207ENST00000486572 IGSF9BQ9UPX0 1349 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 MBLAC1A4D2B0 266 aaPredicted RBP20.54■□□□□ 0.88
COL1A1-207ENST00000486572 SOX1O00570 391 aaPredicted RBP20.54■□□□□ 0.88
COL1A1-207ENST00000486572 CAND2O75155 1236 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 PARNO95453 639 aaKnown RBP20.54■□□□□ 0.88
COL1A1-207ENST00000486572 FGBP02675 491 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 THPOP40225 353 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 IGBP1P78318 339 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 GNL2Q13823 731 aaKnown RBP20.54■□□□□ 0.88
COL1A1-207ENST00000486572 ZNF618Q5T7W0 954 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 TAF2Q6P1X5 1199 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 DEFB128Q7Z7B8 93 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 RDM1Q8NG50 284 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 ATP8B4Q8TF62 1192 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 VWCEQ96DN2 955 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 GABBR1Q9UBS5 961 aa20.54■□□□□ 0.88
COL1A1-207ENST00000486572 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.54■□□□□ 0.88
COL1A1-207ENST00000486572 SCN5AQ14524 2016 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 GJB2P29033 226 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 MARCH8Q5T0T0 291 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 TRAF7Q6Q0C0 670 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 B3GNT9Q6UX72 402 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 MIER3Q7Z3K6 550 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 CKAP2LQ8IYA6 745 aa20.53■□□□□ 0.88
COL1A1-207ENST00000486572 MTIF3Q9H2K0 278 aaKnown RBP20.53■□□□□ 0.88
COL1A1-207ENST00000486572 COL1A2P08123 1366 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 MARCH6O60337 910 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 HBP1O60381 514 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 ATP4AP20648 1035 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 RASIP1Q5U651 963 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 RUFY4Q6ZNE9 571 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 NOSTRINQ8IVI9 506 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 SLFN12Q8IYM2 578 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 BBXQ8WY36 941 aaPredicted RBP20.52■□□□□ 0.88
COL1A1-207ENST00000486572 HERVK_113Q902F9 699 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 HAS1Q92839 578 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 VAV3Q9UKW4 847 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 SMC3Q9UQE7 1217 aa20.52■□□□□ 0.88
COL1A1-207ENST00000486572 LAMA3Q16787 3333 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms