RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 TAF2Q6P1X5 1199 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 PLPPR4Q7Z2D5 763 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 PHOSPHO2Q8TCD6 241 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 TNPO1Q92973 898 aaKnown RBP20.78■□□□□ 0.92
CLDN11-206ENST00000486429 GTF3C6Q969F1 213 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 UIMC1Q96RL1 719 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 NKX2-4Q9H2Z4 354 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 YBX2Q9Y2T7 364 aaKnown RBP20.78■□□□□ 0.92
CLDN11-206ENST00000486429 PCDHA11Q9Y5I1 949 aa20.78■□□□□ 0.92
CLDN11-206ENST00000486429 DHX15O43143 795 aaKnown RBP20.77■□□□□ 0.92
CLDN11-206ENST00000486429 ATG7O95352 703 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 LARGE1O95461 756 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 SLC26A2P50443 739 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 USP11P51784 963 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 WDR5P61964 334 aaKnown RBP20.77■□□□□ 0.92
CLDN11-206ENST00000486429 IGBP1P78318 339 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 KRT76Q01546 638 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 NPY5RQ15761 445 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 C8orf34Q49A92 452 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 FAM160B1Q5W0V3 765 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 TBCKQ8TEA7 893 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 MYLIPQ8WY64 445 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 LENG9Q96B70 501 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 SLC28A3Q9HAS3 691 aa20.77■□□□□ 0.92
CLDN11-206ENST00000486429 KAT6AQ92794 2004 aa20.77■□□□□ 0.91
CLDN11-206ENST00000486429 ABHD14A-ACY1A0A1B0GW23 586 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 MBLAC1A4D2B0 266 aaPredicted RBP20.76■□□□□ 0.91
CLDN11-206ENST00000486429 RRN3P2A6NIE6 340 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 EFCAB14O75071 495 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 CTDNEP1O95476 244 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 INSRRP14616 1297 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 PLCB4Q15147 1175 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 ME3Q16798 604 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 ZNF746Q6NUN9 644 aaPredicted RBP20.76■□□□□ 0.91
CLDN11-206ENST00000486429 MIS18BP1Q6P0N0 1132 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 ABHD15Q6UXT9 468 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 RUFY4Q6ZNE9 571 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 RSPH3Q86UC2 560 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 HERC6Q8IVU3 1022 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
CLDN11-206ENST00000486429 NECAB1Q8N987 351 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 WASF1Q92558 559 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 ORC3Q9UBD5 711 aaPredicted RBP20.76■□□□□ 0.91
CLDN11-206ENST00000486429 KCNJ14Q9UNX9 436 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 CHD9Q3L8U1 2897 aa20.76■□□□□ 0.91
CLDN11-206ENST00000486429 IGKV6D-21A0A0A0MT36 114 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 M0R2N6 131 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 FOSL2P15408 326 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 IKBKEQ14164 716 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 GRIN2CQ14957 1233 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 NONOQ15233 471 aaKnown RBP eCLIP20.75■□□□□ 0.91
CLDN11-206ENST00000486429 TCTN1Q2MV58 587 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 PPP2R2DQ66LE6 453 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 KRT25Q7Z3Z0 450 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 SMAP1Q8IYB5 467 aaPredicted RBP20.75■□□□□ 0.91
CLDN11-206ENST00000486429 PHF20Q9BVI0 1012 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 ZNF302Q9NR11 478 aa20.75■□□□□ 0.91
CLDN11-206ENST00000486429 PTPRSQ13332 1948 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 POTEB3A0JP26 581 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 DTNBO60941 627 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 MYOGP15173 224 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 MARCH8Q5T0T0 291 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 PDXDC2PQ6P474 469 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 POTEBQ6S5H4 581 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 RPAINQ86UA6 219 aa20.74■□□□□ 0.91
CLDN11-206ENST00000486429 CCDC194A0A1B0GVG4 234 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 KIF28PB7ZC32 967 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 MSH4O15457 936 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 EDIL3O43854 480 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 TDP2O95551 362 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 RPLP2P05387 115 aaKnown RBP20.73■□□□□ 0.91
CLDN11-206ENST00000486429 PSAPP07602 524 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 DEFB103AP81534 67 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 PLEKHG4Q58EX7 1191 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 FAM26DQ5JW98 314 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 DBF4BQ8NFT6 615 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 ATP8B4Q8TF62 1192 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 SEPT8Q92599 483 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 SIP14410 1827 aa20.73■□□□□ 0.91
CLDN11-206ENST00000486429 WDR64B1ANS9 1081 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 HBP1O60381 514 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 GAS7O60861 476 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 CA3P07451 260 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 INF2Q27J81 1249 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 Q4G0T1 1027 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 LRCH2Q5VUJ6 765 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 SWSAP1Q6NVH7 229 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 MOXD1Q6UVY6 613 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 NSUN7Q8NE18 718 aaKnown RBP20.72■□□□□ 0.91
CLDN11-206ENST00000486429 TRAPPC12Q8WVT3 735 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 DNAJB3Q8WWF6 145 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 SLC5A5Q92911 643 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 ZBTB10Q96DT7 871 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 RIT2Q99578 217 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 TEKT3Q9BXF9 490 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 FAM49AQ9H0Q0 323 aaPredicted RBP20.72■□□□□ 0.91
CLDN11-206ENST00000486429 GJB4Q9NTQ9 266 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 SAMM50Q9Y512 469 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 PCDHA10Q9Y5I2 948 aa20.72■□□□□ 0.91
CLDN11-206ENST00000486429 COL6A3P12111 3177 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms