RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 SAMM50Q9Y512 469 aa12.52□□□□□ -0.41
SNX21-211ENST00000486336 TMEM265A0A087WTH1 108 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 RRN3P2A6NIE6 340 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
SNX21-211ENST00000486336 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 LARGE1O95461 756 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 CTDNEP1O95476 244 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 CCNE2O96020 404 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 HOXC8P31273 242 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 CIITAP33076 1130 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 USP11P51784 963 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 IKBKEQ14164 716 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 GRIN2CQ14957 1233 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 PLCB4Q15147 1175 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 SWSAP1Q6NVH7 229 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 PDXDC2PQ6P474 469 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 TRAF7Q6Q0C0 670 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 PLPPR4Q7Z2D5 763 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 CKAP2LQ8IYA6 745 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 TET1Q8NFU7 2136 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 WASF1Q92558 559 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 SLC9A7Q96T83 725 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 ZNF302Q9NR11 478 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 TUBE1Q9UJT0 475 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
SNX21-211ENST00000486336 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
SNX21-211ENST00000486336 CCDC194A0A1B0GVG4 234 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 MSH4O15457 936 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 ATG7O95352 703 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 CXCL10P02778 98 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 ADAM17P78536 824 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 NONOQ15233 471 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNX21-211ENST00000486336 INF2Q27J81 1249 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 TCTN1Q2MV58 587 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 C8orf34Q49A92 452 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 FAM117BQ6P1L5 589 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 DBF4BQ8NFT6 615 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 TRAPPC12Q8WVT3 735 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 DNAJB3Q8WWF6 145 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 FAM49AQ9H0Q0 323 aaPredicted RBP12.5□□□□□ -0.41
SNX21-211ENST00000486336 PCDHA11Q9Y5I1 949 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
SNX21-211ENST00000486336 ABHD14A-ACY1A0A1B0GW23 586 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 CHMP2AO43633 222 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 EDIL3O43854 480 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 GAS7O60861 476 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 CAND2O75155 1236 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 TDP2O95551 362 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 PSAPP07602 524 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 FOSL2P15408 326 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 WDR5P61964 334 aaKnown RBP12.49□□□□□ -0.41
SNX21-211ENST00000486336 KRT76Q01546 638 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 LETM2Q2VYF4 491 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 PPP2R2DQ66LE6 453 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 ZNF746Q6NUN9 644 aaPredicted RBP12.49□□□□□ -0.41
SNX21-211ENST00000486336 TAF2Q6P1X5 1199 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
SNX21-211ENST00000486336 HERC6Q8IVU3 1022 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
SNX21-211ENST00000486336 FAM177A1Q8N128 213 aaPredicted RBP12.49□□□□□ -0.41
SNX21-211ENST00000486336 SLC17A8Q8NDX2 589 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 SEPT8Q92599 483 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 GJA10Q969M2 543 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 PHF20Q9BVI0 1012 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 PRDM12Q9H4Q4 367 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 GABBR1Q9UBS5 961 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 PCDHA10Q9Y5I2 948 aa12.49□□□□□ -0.41
SNX21-211ENST00000486336 IGKV6D-21A0A0A0MT36 114 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 M0R2N6 131 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 TLL1O43897 1013 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 HBP1O60381 514 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 JAK2O60674 1132 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 EFCAB14O75071 495 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 CHRNA1P02708 482 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 SLC26A2P50443 739 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 DEFB103AP81534 67 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 NPY5RQ15761 445 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 LRCH2Q5VUJ6 765 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 PIK3AP1Q6ZUJ8 805 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 SMAP1Q8IYB5 467 aaPredicted RBP12.48□□□□□ -0.41
SNX21-211ENST00000486336 OXER1Q8TDS5 423 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms