RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 DCXO43602 365 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 PPP1R11O60927 126 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-226ENST00000486210 UBA1P22314 1058 aaKnown RBP20.17■□□□□ 0.82
MCF2L-226ENST00000486210 ZP2Q05996 745 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 PGM5Q15124 567 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 HOMER1Q86YM7 354 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 TMEM192Q8IY95 271 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-226ENST00000486210 PIGSQ96S52 555 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 LZTS2Q9BRK4 669 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 BCAS3Q9H6U6 928 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 PCDHA1Q9Y5I3 950 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 CNTNAP5Q8WYK1 1306 aa20.17■□□□□ 0.82
MCF2L-226ENST00000486210 CCDC196A0A1B0GTZ2 297 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 C17orf102A2RUQ5 167 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 C19orf67A6NJJ6 358 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 UPP2O95045 317 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 CTDNEP1O95476 244 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 SMARCA1P28370 1054 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 MRE11P49959 708 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 KCNV1Q6PIU1 500 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 VSIG10LQ86VR7 867 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 ATP6V0A1Q93050 837 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 PHKBQ93100 1093 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 YME1L1Q96TA2 773 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 RNPEPQ9H4A4 650 aa20.16■□□□□ 0.82
MCF2L-226ENST00000486210 NSUN3Q9H649 340 aaKnown RBP20.16■□□□□ 0.82
MCF2L-226ENST00000486210 CTSHP09668 335 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 SMIM10L2AP0DMW4 78 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 SMIM10L2BP0DMW5 78 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-226ENST00000486210 LTBRP36941 435 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 MCM2P49736 904 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 NHLH1Q02575 133 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 CSPP1Q1MSJ5 1256 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 SEPT8Q92599 483 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 FBXL18Q96ME1 805 aa20.15■□□□□ 0.82
MCF2L-226ENST00000486210 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
MCF2L-226ENST00000486210 ZNF318Q5VUA4 2279 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 H3BRB1 525 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 GCOM1H8Y6P7 765 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-226ENST00000486210 LGALS2P05162 132 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 LINC00271P0C7V0 271 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 POLR2MP0CAP2 368 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 IFNAR1P17181 557 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 EP400NLQ6ZTU2 488 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 SNX21Q969T3 373 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 TUT1Q9H6E5 874 aaKnown RBP20.14■□□□□ 0.81
MCF2L-226ENST00000486210 PRKAG3Q9UGI9 489 aa20.14■□□□□ 0.81
MCF2L-226ENST00000486210 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-226ENST00000486210 CPLX1O14810 134 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 ADHFE1Q8IWW8 467 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 RRP36Q96EU6 259 aaKnown RBP20.13■□□□□ 0.81
MCF2L-226ENST00000486210 SLC26A6Q9BXS9 759 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 MLXIPQ9HAP2 919 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 CLDND1Q9NY35 253 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 WDFY4Q6ZS81 3184 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 C5orf42Q9H799 3197 aa20.13■□□□□ 0.81
MCF2L-226ENST00000486210 PNMA6FA0A0J9YX94 578 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 JAK2O60674 1132 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 CAND2O75155 1236 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 TGFB3P10600 412 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 CCND2P30279 289 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 IRS1P35568 1242 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 CTC1Q2NKJ3 1217 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 RPAINQ86UA6 219 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 IFIH1Q9BYX4 1025 aaKnown RBP20.12■□□□□ 0.81
MCF2L-226ENST00000486210 TELO2Q9Y4R8 837 aa20.12■□□□□ 0.81
MCF2L-226ENST00000486210 BAZ2BQ9UIF8 2168 aaKnown RBP20.12■□□□□ 0.81
MCF2L-226ENST00000486210 PRPF3O43395 683 aaKnown RBP20.11■□□□□ 0.81
MCF2L-226ENST00000486210 ADAM17P78536 824 aa20.11■□□□□ 0.81
MCF2L-226ENST00000486210 DLX2Q07687 328 aaPredicted RBP20.11■□□□□ 0.81
MCF2L-226ENST00000486210 PKN1Q16512 942 aa20.11■□□□□ 0.81
MCF2L-226ENST00000486210 HFE2Q6ZVN8 426 aa20.11■□□□□ 0.81
MCF2L-226ENST00000486210 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
MCF2L-226ENST00000486210 NSUN7Q8NE18 718 aaKnown RBP20.11■□□□□ 0.81
MCF2L-226ENST00000486210 KCNH6Q9H252 994 aa20.11■□□□□ 0.81
MCF2L-226ENST00000486210 SETD4Q9NVD3 440 aa20.11■□□□□ 0.81
MCF2L-226ENST00000486210 C5orf67F2Z3F1 127 aa20.1■□□□□ 0.81
MCF2L-226ENST00000486210 K7ELQ4 463 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-226ENST00000486210 SSRP1Q08945 709 aaKnown RBP20.1■□□□□ 0.81
MCF2L-226ENST00000486210 SEMA3FQ13275 785 aa20.1■□□□□ 0.81
MCF2L-226ENST00000486210 GNPTABQ3T906 1256 aa20.1■□□□□ 0.81
MCF2L-226ENST00000486210 FAM26DQ5JW98 314 aa20.1■□□□□ 0.81
MCF2L-226ENST00000486210 CPLX2Q6PUV4 134 aaKnown RBP20.1■□□□□ 0.81
MCF2L-226ENST00000486210 RC3H2Q9HBD1 1191 aaKnown RBP20.1■□□□□ 0.81
MCF2L-226ENST00000486210 FAM50BQ9Y247 325 aa20.1■□□□□ 0.81
MCF2L-226ENST00000486210 KAT6AQ92794 2004 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 GRM6O15303 877 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 FDPSP14324 419 aaKnown RBP20.09■□□□□ 0.81
MCF2L-226ENST00000486210 CTNNB1P35222 781 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 MRPS9P82933 396 aaKnown RBP20.09■□□□□ 0.81
MCF2L-226ENST00000486210 HYAL1Q12794 435 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 SMAD2Q15796 467 aaKnown RBP20.09■□□□□ 0.81
MCF2L-226ENST00000486210 TRIM50Q86XT4 487 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 FIBCD1Q8N539 461 aa20.09■□□□□ 0.81
MCF2L-226ENST00000486210 APBB2Q92870 758 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms