RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 RALYLQ86SE5 291 aaKnown RBP6.39□□□□□ -1.39
GCFC2-209ENST00000486016 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 PCDH19Q8TAB3 1148 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 CDK5RAP1Q96SZ6 601 aaKnown RBP6.39□□□□□ -1.39
GCFC2-209ENST00000486016 JADE2Q9NQC1 790 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 SRPK3Q9UPE1 567 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 PTPN22Q9Y2R2 807 aa6.39□□□□□ -1.39
GCFC2-209ENST00000486016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.38□□□□□ -1.39
GCFC2-209ENST00000486016 MAN2B1O00754 1011 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 PDPK1O15530 556 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 FOXS1O43638 330 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 SELENOPP49908 381 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 PAK1Q13153 545 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 TCTN3Q6NUS6 607 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 DPH6Q7L8W6 267 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 GPR155Q7Z3F1 870 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 PTPRN2Q92932 1015 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 GNRHR2Q96P88 292 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 TACO1Q9BSH4 297 aaKnown RBP6.38□□□□□ -1.39
GCFC2-209ENST00000486016 ALG1Q9BT22 464 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 ZNF747Q9BV97 191 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 CCDC113Q9H0I3 377 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 SLC39A2Q9NP94 309 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 TESMINQ9Y4I5 508 aa6.38□□□□□ -1.39
GCFC2-209ENST00000486016 H0Y858 1186 aa6.37□□□□□ -1.39
GCFC2-209ENST00000486016 ARVCFO00192 962 aa6.37□□□□□ -1.39
GCFC2-209ENST00000486016 FZD7O75084 574 aa6.37□□□□□ -1.39
GCFC2-209ENST00000486016 ZNF888P0CJ79 500 aaPredicted RBP6.37□□□□□ -1.39
GCFC2-209ENST00000486016 PTPN1P18031 435 aaKnown RBP6.37□□□□□ -1.39
GCFC2-209ENST00000486016 TOP3AQ13472 1001 aaPredicted RBP6.37□□□□□ -1.39
GCFC2-209ENST00000486016 GPR19Q15760 415 aa6.37□□□□□ -1.39
GCFC2-209ENST00000486016 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
GCFC2-209ENST00000486016 ARHGAP36Q6ZRI8 547 aa6.37□□□□□ -1.39
GCFC2-209ENST00000486016 MAMDC2Q7Z304 686 aaPredicted RBP6.37□□□□□ -1.39
GCFC2-209ENST00000486016 ZBTB38Q8NAP3 1195 aaPredicted RBP6.37□□□□□ -1.39
GCFC2-209ENST00000486016 TRBV23-1A0A0A0MS06 115 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 AQP7O14520 342 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 POLD1P28340 1107 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 BTBD8Q5XKL5 378 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 TRIM55Q9BYV6 548 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 DEF6Q9H4E7 631 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 CBLCQ9ULV8 474 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 PCDHA8Q9Y5H6 950 aa6.36□□□□□ -1.39
GCFC2-209ENST00000486016 DIAPH1O60610 1272 aaKnown RBP6.35□□□□□ -1.39
GCFC2-209ENST00000486016 PDE6AP16499 860 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 USP10Q14694 798 aaKnown RBP6.35□□□□□ -1.39
GCFC2-209ENST00000486016 C16orf59Q7L2K0 433 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 OSTM1Q86WC4 334 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 NLGN4XQ8N0W4 816 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 FBXW5Q969U6 566 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 EXOC2Q96KP1 924 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 LMF1Q96S06 567 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 SEMA4AQ9H3S1 761 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 BTBD7Q9P203 1132 aa6.35□□□□□ -1.39
GCFC2-209ENST00000486016 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 CUTAO60888 179 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 STK10O94804 968 aaKnown RBP6.34□□□□□ -1.39
GCFC2-209ENST00000486016 FAM153BP0C7A2 387 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 PYGMP11217 842 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 RBM25P49756 843 aaKnown RBP6.34□□□□□ -1.39
GCFC2-209ENST00000486016 SUMO1P63165 101 aaKnown RBP6.34□□□□□ -1.39
GCFC2-209ENST00000486016 SPDYAQ5MJ70 313 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 NBPF6Q5VWK0 638 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 PTRH1Q86Y79 214 aaKnown RBP6.34□□□□□ -1.39
GCFC2-209ENST00000486016 PALM2Q8IXS6 379 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 CKAP2LQ8IYA6 745 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 NEIL1Q96FI4 390 aaPredicted RBP6.34□□□□□ -1.39
GCFC2-209ENST00000486016 NBPF4Q96M43 638 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 CARD11Q9BXL7 1154 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 PCED1AQ9H1Q7 454 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 VPS11Q9H270 941 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 SMURF1Q9HCE7 757 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 PFDN2Q9UHV9 154 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 TCAF1Q9Y4C2 921 aa6.34□□□□□ -1.39
GCFC2-209ENST00000486016 MUSKO15146 869 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 MPIG6BO95866 241 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 AMHP03971 560 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 C4BPAP04003 597 aaKnown RBP6.33□□□□□ -1.4
GCFC2-209ENST00000486016 JAM2P57087 298 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 LACTBP83111 547 aaPredicted RBP6.33□□□□□ -1.4
GCFC2-209ENST00000486016 SSRP1Q08945 709 aaKnown RBP6.33□□□□□ -1.4
GCFC2-209ENST00000486016 SEC23AQ15436 765 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 STILQ15468 1287 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 MTERF2Q49AM1 385 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 FIGNQ5HY92 759 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 RIC8BQ9NVN3 520 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 ZFR2Q9UPR6 939 aaKnown RBP6.33□□□□□ -1.4
GCFC2-209ENST00000486016 ATP23Q9Y6H3 246 aa6.33□□□□□ -1.4
GCFC2-209ENST00000486016 ESYT3A0FGR9 886 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 MATN2O00339 956 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 AOAHP28039 575 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 ZC3H6P61129 1189 aaKnown RBP6.32□□□□□ -1.4
GCFC2-209ENST00000486016 GABREP78334 506 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 IL13RA1P78552 427 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 DUSP8Q13202 625 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 SERINC3Q13530 473 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 LONRF2Q1L5Z9 754 aa6.32□□□□□ -1.4
GCFC2-209ENST00000486016 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms