RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, human

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DOA-204	ENST00000485901	MTMR1	Q13613	665 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	PUS10	Q3MIT2	529 aa	Known RBP	13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	TMEM31	Q5JXX7	168 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	GDF6	Q6KF10	455 aa	Predicted RBP	13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	C7orf31	Q8N865	590 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	KAT2B	Q92831	832 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	PGBD1	Q96JS3	809 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	SPATA33	Q96N06	139 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	CTAGE1	Q96RT6	745 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	MXRA8	Q9BRK3	442 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	ZBED2	Q9BTP6	218 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	PCDHA4	Q9UN74	947 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	INSL6	Q9Y581	213 aa		13.65	□□□□□ -0.22
HLA-DOA-204	ENST00000485901	EPOP	A6NHQ4	379 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	RFXAP	O00287	272 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CAND2	O75155	1236 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	F2	P00734	622 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CYP3A4	P08684	503 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ARHGAP4	P98171	946 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SEMA3F	Q13275	785 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	GPNMB	Q14956	572 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CEP55	Q53EZ4	464 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	METTL7B	Q6UX53	244 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	BLID	Q8IZY5	108 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	AIFM3	Q96NN9	605 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	LLPH	Q9BRT6	129 aa	Known RBP	13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	LRFN3	Q9BTN0	628 aa		13.64	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	PI4K2B	G5E9Z4	385 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	MEIS1	O00470	390 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	FDPS	P14324	419 aa	Known RBP	13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	MCM2	P49736	904 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	HSDL1	Q3SXM5	330 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	LEXM	Q3ZCV2	418 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CYFIP1	Q7L576	1253 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NIPA1	Q7RTP0	329 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	DAGLB	Q8NCG7	672 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NSUN7	Q8NE18	718 aa	Known RBP	13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NECAB3	Q96P71	396 aa	Predicted RBP	13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ALG1	Q9BT22	464 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	PHF20	Q9BVI0	1012 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CERS4	Q9HA82	394 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KAT6A	Q92794	2004 aa		13.63	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NOP56	O00567	594 aa	Known RBP	13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ADAMTS3	O15072	1205 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SORBS3	O60504	671 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NBN	O60934	754 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ATP9A	O75110	1047 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KCNA2	P16389	499 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	PSEN2	P49810	448 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	USP11	P51784	963 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CCDC83	Q8IWF9	413 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CYP2W1	Q8TAV3	490 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	RASGRP4	Q8TDF6	673 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CRYGN	Q8WXF5	182 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	DHX38	Q92620	1227 aa	Known RBP	13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SUGCT	Q9HAC7	445 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KCNH7	Q9NS40	1196 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	HDAC6	Q9UBN7	1215 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KCNJ14	Q9UNX9	436 aa		13.62	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	COL4A4	P53420	1690 aa	Predicted RBP	13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	COL4A6	Q14031	1691 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901		M0R2N6	131 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NCK2	O43639	380 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	JAK2	O60674	1132 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	DTNB	O60941	627 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	LGR5	O75473	907 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ARHGEF15	O94989	841 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CIITA	P33076	1130 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	HTRA4	P83105	476 aa	Predicted RBP	13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	TRIM29	Q14134	588 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	MFSD10	Q14728	455 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	PTPRO	Q16827	1216 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KIAA0753	Q2KHM9	967 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	TRIM71	Q2Q1W2	868 aa	Known RBP	13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	PLA2G4D	Q86XP0	818 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SP7	Q8TDD2	431 aa	Predicted RBP	13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SDF4	Q9BRK5	362 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KCNH6	Q9H252	994 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	EPHX3	Q9H6B9	360 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	BCAS3	Q9H6U6	928 aa		13.61	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	LINC01553	A4QN01	128 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	FAM86B1	E9PN63	330 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	AMH	P03971	560 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	FAM86B2	P0C5J1	330 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	AR	P10275	920 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ALAD	P13716	330 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	HOXC8	P31273	242 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	CHMP4BP1	P59074	171 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	HMGN5	P82970	282 aa	Known RBP	13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	ST3GAL1	Q11201	340 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	MKRN4P	Q13434	485 aa	Predicted RBP	13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NONO	Q15233	471 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	NPY5R	Q15761	445 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	TRAF7	Q6Q0C0	670 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	KRT25	Q7Z3Z0	450 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SERINC5	Q86VE9	423 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	SEPT1	Q8WYJ6	367 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	GPR20	Q99678	358 aa		13.6	□□□□□ -0.23
HLA-DOA-204	ENST00000485901	UBE2Z	Q9H832	354 aa	Predicted RBP	13.6	□□□□□ -0.23

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