RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SEPT7Q16181 437 aaKnown RBP5.22□□□□□ -1.57
RTN4-213ENST00000485749 DDB1Q16531 1140 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 TTC31Q49AM3 519 aaPredicted RBP5.22□□□□□ -1.57
RTN4-213ENST00000485749 CDCA2Q69YH5 1023 aaPredicted RBP5.22□□□□□ -1.57
RTN4-213ENST00000485749 IL31Q6EBC2 164 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 LHFPL2Q6ZUX7 228 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 RSRC2Q7L4I2 434 aaKnown RBP5.22□□□□□ -1.57
RTN4-213ENST00000485749 FGD2Q7Z6J4 655 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 MORC1Q86VD1 984 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 C7orf61Q8IZ16 206 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 CNTD1Q8N815 330 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 ZFPM2Q8WW38 1151 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 PPP1R14AQ96A00 147 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 CCDC120Q96HB5 630 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 SCLYQ96I15 445 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 FGD4Q96M96 766 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 SPAG5Q96R06 1193 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 YIPF4Q9BSR8 244 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 AP1M1Q9BXS5 423 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 SLC13A1Q9BZW2 595 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 DISC1Q9NRI5 854 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 UTP6Q9NYH9 597 aaKnown RBP5.22□□□□□ -1.57
RTN4-213ENST00000485749 PRR13Q9NZ81 148 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 XPO7Q9UIA9 1087 aaKnown RBP5.22□□□□□ -1.57
RTN4-213ENST00000485749 ZNF180Q9UJW8 692 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 TRHDEQ9UKU6 1024 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 AKT3Q9Y243 479 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 AFG3L2Q9Y4W6 797 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 SNX5Q9Y5X3 404 aa5.22□□□□□ -1.57
RTN4-213ENST00000485749 TCRBV16S1A1N1A0A5B0 115 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 GNAT3A8MTJ3 354 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 AQP7O14520 342 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 NEMP1O14524 444 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 SNX2O60749 519 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 TPPPO94811 219 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 F2P00734 622 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 SCG5P05408 212 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 PYGMP11217 842 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 ITGA4P13612 1032 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 ZSCAN20P17040 1043 aaPredicted RBP5.21□□□□□ -1.58
RTN4-213ENST00000485749 ITIH2P19823 946 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 TNFAIP3P21580 790 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 HOXC13P31276 330 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 NTF4P34130 210 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 RAP1GAPP47736 663 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 NEK3P51956 506 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 RNF4P78317 190 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 STK3Q13188 491 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 GRB10Q13322 594 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 IKZF1Q13422 519 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 PTPN14Q15678 1187 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 PARP10Q53GL7 1025 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 PPM1JQ5JR12 505 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 ANKRD45Q5TZF3 282 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 TDRD10Q5VZ19 366 aaKnown RBP5.21□□□□□ -1.58
RTN4-213ENST00000485749 ISM2Q6H9L7 571 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 TOP6BLQ8N6T0 577 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 AFAP1L1Q8TED9 768 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 JPH3Q8WXH2 748 aaPredicted RBP5.21□□□□□ -1.58
RTN4-213ENST00000485749 TBC1D20Q96BZ9 403 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 WNK4Q96J92 1243 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 SMAD5Q99717 465 aaKnown RBP5.21□□□□□ -1.58
RTN4-213ENST00000485749 TRIM8Q9BZR9 551 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 CCDC8Q9H0W5 538 aaPredicted RBP5.21□□□□□ -1.58
RTN4-213ENST00000485749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.21□□□□□ -1.58
RTN4-213ENST00000485749 PRDM11Q9NQV5 511 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 CGNQ9P2M7 1197 aaKnown RBP5.21□□□□□ -1.58
RTN4-213ENST00000485749 CEP131Q9UPN4 1083 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 ZNF451Q9Y4E5 1061 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 CSADQ9Y600 493 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 TNKSO95271 1327 aa5.21□□□□□ -1.58
RTN4-213ENST00000485749 KPNA6O60684 536 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 COQ9O75208 318 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 GYS1P13807 737 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 TRIM27P14373 513 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 ADD2P35612 726 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 CLCN7P51798 805 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 GFRA1P56159 465 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 KRT85P78386 507 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 PLIN5Q00G26 463 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 AUHQ13825 339 aaKnown RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 ZNF460Q14592 562 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 DNTTIP2Q5QJE6 756 aaKnown RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 NBPF12Q5TAG4 269 aaPredicted RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 DCAF15Q66K64 600 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 MZT2BQ6NZ67 158 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 ZCCHC8Q6NZY4 707 aaKnown RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 MZT2AQ6P582 158 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 SPOCD1Q6ZMY3 1216 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 CDC37L1Q7L3B6 337 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 ERC1Q8IUD2 1116 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 IQCF2Q8IXL9 164 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 APPL2Q8NEU8 664 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 BAHD1Q8TBE0 780 aaPredicted RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 SYTL5Q8TDW5 730 aaPredicted RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 TRIM63Q969Q1 353 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 TRMT2BQ96GJ1 504 aaKnown RBP5.2□□□□□ -1.58
RTN4-213ENST00000485749 SERINC2Q96SA4 455 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
RTN4-213ENST00000485749 RHOBTB2Q9BYZ6 727 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms