RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 WRAP73Q9P2S5 460 aaPredicted RBP13.39□□□□□ -0.27
APTX-227ENST00000485479 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 EVI5O60447 810 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 F13A1P00488 732 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 CYP2C9P11712 490 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 ATP4AP20648 1035 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 STAT5BP51692 787 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 GRIN1Q05586 938 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 SF3A1Q15459 793 aaKnown RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 ZNF746Q6NUN9 644 aaPredicted RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 BRAPQ7Z569 592 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 HAS3O00219 553 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 ZNF862O60290 1169 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 ATG7O95352 703 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 SMIM10L2AP0DMW4 78 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 SMIM10L2BP0DMW5 78 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 RGS19P49795 217 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 CTTNQ14247 550 aaKnown RBP13.38□□□□□ -0.27
APTX-227ENST00000485479 MIS18BP1Q6P0N0 1132 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 C7orf31Q8N865 590 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
APTX-227ENST00000485479 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 ZBTB39O15060 712 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 CABYRO75952 493 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
APTX-227ENST00000485479 PSAPP07602 524 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 ITGB8P26012 769 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 PPP2R5CQ13362 524 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 SNX17Q15036 470 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
APTX-227ENST00000485479 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 WNT8BQ93098 351 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
APTX-227ENST00000485479 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
APTX-227ENST00000485479 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 CEP290O15078 2479 aa13.37□□□□□ -0.27
APTX-227ENST00000485479 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 TBX3O15119 743 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 LGR5O75473 907 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 CDK7P50613 346 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 LMBR1Q8WVP7 490 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 SMARCAD1Q9H4L7 1026 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 ERAP1Q9NZ08 941 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 TRIM43BA6NCK2 446 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 TREHO43280 583 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 KPNA6O60684 536 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 BRD1O95696 1058 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
APTX-227ENST00000485479 PRKCEQ02156 737 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 PTGISQ16647 500 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 PLA2G4FQ68DD2 849 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 SLC43A3Q8NBI5 491 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 TRIM43Q96BQ3 446 aaPredicted RBP13.36□□□□□ -0.27
APTX-227ENST00000485479 LXNQ9BS40 222 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
APTX-227ENST00000485479 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 INSRRP14616 1297 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 JAK3P52333 1124 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
APTX-227ENST00000485479 PPFIA1Q13136 1202 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
APTX-227ENST00000485479 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 TPH2Q8IWU9 490 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
APTX-227ENST00000485479 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
APTX-227ENST00000485479 NOD1Q9Y239 953 aa13.35□□□□□ -0.27
APTX-227ENST00000485479 MAFBQ9Y5Q3 323 aaPredicted RBP13.35□□□□□ -0.27
APTX-227ENST00000485479 SFNP31947 248 aa13.34□□□□□ -0.27
APTX-227ENST00000485479 PTPAQ15257 358 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms