RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 ZNF568Q3ZCX4 644 aa7.42□□□□□ -1.22
POLR2B-209ENST00000484821 SGSM3Q96HU1 749 aa7.42□□□□□ -1.22
POLR2B-209ENST00000484821 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
POLR2B-209ENST00000484821 SLC39A2Q9NP94 309 aa7.42□□□□□ -1.22
POLR2B-209ENST00000484821 NARSO43776 548 aaKnown RBP7.41□□□□□ -1.22
POLR2B-209ENST00000484821 CUTAO60888 179 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 SOD2P04179 222 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 FGFR1P11362 822 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 CR2P20023 1033 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 ACO1P21399 889 aaKnown RBP7.41□□□□□ -1.22
POLR2B-209ENST00000484821 KRTAP1-1Q07627 177 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 CELF2-AS1Q8N7Q2 184 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 SH3RF2Q8TEC5 729 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 OSBP2Q969R2 916 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 ST7Q9NRC1 585 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 OAZ3Q9UMX2 235 aa7.41□□□□□ -1.22
POLR2B-209ENST00000484821 ESYT3A0FGR9 886 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 PRODHO43272 600 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 ZNF202O95125 648 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 FGRP09769 529 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 ABHD18Q0P651 414 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 DBPQ10586 325 aaPredicted RBP7.4□□□□□ -1.22
POLR2B-209ENST00000484821 IFNL3Q8IZI9 196 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.4□□□□□ -1.225e-6■□□□□ 9.4
POLR2B-209ENST00000484821 AARSD1Q9BTE6 412 aaKnown RBP7.4□□□□□ -1.22
POLR2B-209ENST00000484821 ARHGEF4Q9NR80 690 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 SLC30A1Q9Y6M5 507 aa7.4□□□□□ -1.22
POLR2B-209ENST00000484821 TCRBV5S4A2TA0A5A2 114 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 FAM47E-STBD1D6RA91 191 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 PABPC1P11940 636 aaKnown RBP7.39□□□□□ -1.23
POLR2B-209ENST00000484821 DGCR2P98153 550 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 PTH1RQ03431 593 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 NOLC1Q14978 699 aaKnown RBP eCLIP7.39□□□□□ -1.23
POLR2B-209ENST00000484821 MAMDC4Q6UXC1 1216 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 POLNQ7Z5Q5 900 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 CD244Q9BZW8 370 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 CSRNP2Q9H175 543 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 IPPKQ9H8X2 491 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 C11orf21Q9P2W6 132 aa7.39□□□□□ -1.23
POLR2B-209ENST00000484821 BLACEA4D250 179 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 MATN2O00339 956 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 ERCC5P28715 1186 aaPredicted RBP7.38□□□□□ -1.23
POLR2B-209ENST00000484821 DUSP8Q13202 625 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 LSM12Q3MHD2 195 aaKnown RBP7.38□□□□□ -1.23
POLR2B-209ENST00000484821 ZMAT1Q5H9K5 638 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 DPP8Q6V1X1 898 aaPredicted RBP7.38□□□□□ -1.23
POLR2B-209ENST00000484821 NSMFQ6X4W1 530 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 HNRNPLLQ8WVV9 542 aaKnown RBP7.38□□□□□ -1.23
POLR2B-209ENST00000484821 CHFRQ96EP1 664 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 DPYSL5Q9BPU6 564 aa7.38□□□□□ -1.23
POLR2B-209ENST00000484821 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
POLR2B-209ENST00000484821 RRADP55042 308 aa7.37□□□□□ -1.23
POLR2B-209ENST00000484821 DDR2Q16832 855 aa7.37□□□□□ -1.23
POLR2B-209ENST00000484821 BTBD8Q5XKL5 378 aa7.37□□□□□ -1.23
POLR2B-209ENST00000484821 AMER2Q8N7J2 671 aa7.37□□□□□ -1.23
POLR2B-209ENST00000484821 ASXL2Q76L83 1435 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 WDR33Q9C0J8 1336 aaKnown RBP7.36□□□□□ -1.23
POLR2B-209ENST00000484821 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 CDC14BO60729 498 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 ETV4P43268 484 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 PURAQ00577 322 aaKnown RBP7.36□□□□□ -1.23
POLR2B-209ENST00000484821 GNL2Q13823 731 aaKnown RBP7.36□□□□□ -1.23
POLR2B-209ENST00000484821 MCF2L2Q86YR7 1114 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 C1orf210Q8IVY1 113 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 IL17DQ8TAD2 202 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 SCYL1Q96KG9 808 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 OR14A2Q96R54 314 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 NR2E1Q9Y466 385 aa7.36□□□□□ -1.23
POLR2B-209ENST00000484821 C1SP09871 688 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 MCM7P33993 719 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 DPTQ07507 201 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 NFYCQ13952 458 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 SMN1Q16637 294 aaKnown RBP7.35□□□□□ -1.23
POLR2B-209ENST00000484821 TBR1Q16650 682 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
POLR2B-209ENST00000484821 FAM89AQ96GI7 184 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 PLA2G12BQ9BX93 195 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 TRIM8Q9BZR9 551 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 ZDHHC5Q9C0B5 715 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 IKZF4Q9H2S9 585 aa7.35□□□□□ -1.23
POLR2B-209ENST00000484821 R3HCC1Q9Y3T6 440 aaKnown RBP7.35□□□□□ -1.23
POLR2B-209ENST00000484821 PTPN1P18031 435 aaKnown RBP7.34□□□□□ -1.23
POLR2B-209ENST00000484821 IFRD2Q12894 506 aaPredicted RBP7.34□□□□□ -1.23
POLR2B-209ENST00000484821 WDR72Q3MJ13 1102 aa7.34□□□□□ -1.23
POLR2B-209ENST00000484821 NLGN4XQ8N0W4 816 aa7.34□□□□□ -1.23
POLR2B-209ENST00000484821 CEP89Q96ST8 783 aa7.34□□□□□ -1.23
POLR2B-209ENST00000484821 ALG1Q9BT22 464 aa7.34□□□□□ -1.23
POLR2B-209ENST00000484821 SRPK3Q9UPE1 567 aa7.34□□□□□ -1.23
POLR2B-209ENST00000484821 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 IL13RA1P78552 427 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 ARID5AQ03989 594 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 ARHGAP36Q6ZRI8 547 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 ANKS3Q6ZW76 656 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 LARP4Q71RC2 724 aaKnown RBP eCLIP7.33□□□□□ -1.24
POLR2B-209ENST00000484821 CACTINQ8WUQ7 758 aaKnown RBP7.33□□□□□ -1.24
POLR2B-209ENST00000484821 CFHR4Q92496 578 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 PLEKHG4BQ96PX9 1271 aa7.33□□□□□ -1.24
POLR2B-209ENST00000484821 C12orf65Q9H3J6 166 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms