RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 BIN1O00499 593 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 CBFA2T2O43439 604 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SLC37A4O43826 429 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 ZNF500O60304 480 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 MARCH6O60337 910 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 ZBED4O75132 1171 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 RHOBTB3O94955 611 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 TDP2O95551 362 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 RPN1P04843 607 aaKnown RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 ZNF18P17022 549 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 INPP5BP32019 993 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 CLCN1P35523 988 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 AFMP43652 599 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 HSD17B4P51659 736 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 PPATQ06203 517 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SPP2Q13103 211 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 PSMD2Q13200 908 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 CUL4BQ13620 913 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 KARSQ15046 597 aaKnown RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 UBE2SQ16763 222 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SH3D19Q5HYK7 790 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 MAP3K21Q5TCX8 1036 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SPATA1Q5VX52 437 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 XRRA1Q6P2D8 792 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 POTEBQ6S5H4 581 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SV2BQ7L1I2 683 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 NIPA1Q7RTP0 329 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 ASCL5Q7RTU5 278 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 CDAN1Q8IWY9 1227 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 FAM178BQ8IXR5 827 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 AOPEPQ8N6M6 819 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 GIMAP8Q8ND71 665 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 ERMNQ8TAM6 284 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 TRIB2Q92519 343 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 TRIM43Q96BQ3 446 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 DHTKD1Q96HY7 919 aaPredicted RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 FEZ1Q99689 392 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 HSD3B7Q9H2F3 369 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SLC38A10Q9HBR0 1119 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 PDLIM7Q9NR12 457 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 RWDD2AQ9UIY3 292 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 PPP1R9AQ9ULJ8 1098 aa6.06□□□□□ -1.44
COL17A1-206ENST00000483876 SETXQ7Z333 2677 aaKnown RBP6.06□□□□□ -1.44
COL17A1-206ENST00000483876 ZNF536O15090 1300 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 KDM3AQ9Y4C1 1321 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 MEIS1O00470 390 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 MAFGO15525 162 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 KLRC4O43908 158 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 PTMAP06454 111 aaKnown RBP6.05□□□□□ -1.44
COL17A1-206ENST00000483876 PRR29P0C7W0 189 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 HOXB3P14651 431 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-206ENST00000483876 PLCG1P19174 1290 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 MSNP26038 577 aaKnown RBP6.05□□□□□ -1.44
COL17A1-206ENST00000483876 RPA1P27694 616 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 CDC25AP30304 524 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 DSG3P32926 999 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 GSDMDP57764 484 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 PLCB2Q00722 1185 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 FPGSQ05932 587 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 SPAG1Q07617 926 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 GRB10Q13322 594 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 COG2Q14746 738 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 RAB30Q15771 203 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 TKFCQ3LXA3 575 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 USH1GQ495M9 461 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 TMEM119Q4V9L6 283 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 HAUS3Q68CZ6 603 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 SAMD1Q6SPF0 538 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-206ENST00000483876 CATSPERGQ6ZRH7 1159 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 ADSSL1Q8N142 457 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 RASSF8Q8NHQ8 419 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 ETNPPLQ8TBG4 499 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 KIFC2Q96AC6 838 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 LENG9Q96B70 501 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 PNMA5Q96PV4 448 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 CTAGE1Q96RT6 745 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 WRNIP1Q96S55 665 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 RIT2Q99578 217 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 POLR3CQ9BUI4 534 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-206ENST00000483876 TRIM9Q9C026 710 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 IRF2BPLQ9H1B7 796 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 NKX2-4Q9H2Z4 354 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 BMP2KQ9NSY1 1161 aaPredicted RBP6.05□□□□□ -1.44
COL17A1-206ENST00000483876 FANCLQ9NW38 375 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 AFG3L2Q9Y4W6 797 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 CFAP47Q6ZTR5 3102 aa6.05□□□□□ -1.44
COL17A1-206ENST00000483876 IGLV3-22A0A075B6J6 115 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 PRR23AA6NEV1 266 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 PP2D1A8MPX8 630 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 PROB1E7EW31 1015 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 FAM86B1E9PN63 330 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 VWA5AO00534 786 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CXCL11O14625 94 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 ABCB7O75027 752 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 FLOT1O75955 427 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 FAM86B2P0C5J1 330 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 PRKCSHP14314 528 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 RAG1P15918 1043 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 VCAM1P19320 739 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CCND3P30281 292 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms