RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 EIF3JO75822 258 aaKnown RBP29.13■■■□□ 2.25
SHOX2-204ENST00000483851 PMS1P54277 932 aaKnown RBP29.13■■■□□ 2.25
SHOX2-204ENST00000483851 HERC4Q5GLZ8 1057 aaPredicted RBP29.13■■■□□ 2.25
SHOX2-204ENST00000483851 FILIP1Q7Z7B0 1213 aa29.13■■■□□ 2.25
SHOX2-204ENST00000483851 CCDC150Q8NCX0 1101 aa29.13■■■□□ 2.25
SHOX2-204ENST00000483851 PAGR1Q9BTK6 254 aa29.13■■■□□ 2.25
SHOX2-204ENST00000483851 INTS13Q9NVM9 706 aa29.13■■■□□ 2.25
SHOX2-204ENST00000483851 TRIM49BA6NDI0 452 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 KCNJ18B7U540 433 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 KCNJ12Q14500 433 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 ARID5BQ14865 1188 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 DNTTIP2Q5QJE6 756 aaKnown RBP29.12■■■□□ 2.25
SHOX2-204ENST00000483851 RINT1Q6NUQ1 792 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 CSGALNACT2Q8N6G5 542 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 SHCBP1Q8NEM2 672 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 DUSP9Q99956 384 aaKnown RBP29.12■■■□□ 2.25
SHOX2-204ENST00000483851 MROH8Q9H579 483 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 UQCRHLA0A096LP55 91 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 DDX39AO00148 427 aaKnown RBP29.12■■■□□ 2.25
SHOX2-204ENST00000483851 FGFR1OPO95684 399 aaKnown RBP29.12■■■□□ 2.25
SHOX2-204ENST00000483851 UQCRHP07919 91 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 GAP43P17677 238 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 ICAM3P32942 547 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 QARSP47897 775 aaKnown RBP29.12■■■□□ 2.25
SHOX2-204ENST00000483851 ANKRD40Q6AI12 368 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 HPS3Q969F9 1004 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 REEP2Q9BRK0 252 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 PKD2L1Q9P0L9 805 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 DBR1Q9UK59 544 aaKnown RBP29.12■■■□□ 2.25
SHOX2-204ENST00000483851 COL4A3BPQ9Y5P4 624 aa29.12■■■□□ 2.25
SHOX2-204ENST00000483851 KIAA1217Q5T5P2 1943 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 SPATA31C2B4DYI2 1134 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 POTEB2H3BUK9 544 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 ATP9AO75110 1047 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 ERCC3P19447 782 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 ALDH5A1P51649 535 aaPredicted RBP29.11■■■□□ 2.25
SHOX2-204ENST00000483851 C1orf186Q6ZWK4 172 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 SMAP1Q8IYB5 467 aaPredicted RBP29.11■■■□□ 2.25
SHOX2-204ENST00000483851 MPHOSPH6Q99547 160 aaKnown RBP29.11■■■□□ 2.25
SHOX2-204ENST00000483851 SRRTQ9BXP5 876 aaKnown RBP29.11■■■□□ 2.25
SHOX2-204ENST00000483851 SEMA6BQ9H3T3 888 aa29.11■■■□□ 2.25
SHOX2-204ENST00000483851 RGS20O76081 388 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 KRT31Q15323 416 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 IRF2BP1Q8IU81 584 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 FAM133AQ8N9E0 248 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 PIGOQ8TEQ8 1089 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 MS4A4AQ96JQ5 239 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 MAGEC2Q9UBF1 373 aaPredicted RBP29.1■■■□□ 2.25
SHOX2-204ENST00000483851 SAMM50Q9Y512 469 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 ZBTB48P10074 688 aaPredicted RBP29.1■■■□□ 2.25
SHOX2-204ENST00000483851 KCNA2P16389 499 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 EDNRBP24530 442 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 CCZ1BP86790 482 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 CCZ1P86791 482 aaPredicted RBP29.1■■■□□ 2.25
SHOX2-204ENST00000483851 SPECC1LQ69YQ0 1117 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 C4orf19Q8IY42 314 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 MYRIPQ8NFW9 859 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 TSG101Q99816 390 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 ODF2LQ9ULJ1 636 aa29.1■■■□□ 2.25
SHOX2-204ENST00000483851 LOC102724159A0A0B4J2E5 919 aa29.09■■■□□ 2.25
SHOX2-204ENST00000483851 NPHP3-ACAD11A0A0J9YXS1 232 aa29.09■■■□□ 2.25
SHOX2-204ENST00000483851 TBCAO75347 108 aaKnown RBP29.09■■■□□ 2.25
SHOX2-204ENST00000483851 PWP2Q15269 919 aaKnown RBP29.09■■■□□ 2.25
SHOX2-204ENST00000483851 RUSC1Q9BVN2 902 aa29.09■■■□□ 2.25
SHOX2-204ENST00000483851 TXNRD2Q9NNW7 524 aa29.09■■■□□ 2.25
SHOX2-204ENST00000483851 OLFML3Q9NRN5 406 aa29.09■■■□□ 2.25
SHOX2-204ENST00000483851 WRAP73Q9P2S5 460 aaPredicted RBP29.09■■■□□ 2.25
SHOX2-204ENST00000483851 SEL1LQ9UBV2 794 aa29.09■■■□□ 2.25
SHOX2-204ENST00000483851 DKC1O60832 514 aaKnown RBP eCLIP29.08■■■□□ 2.25
SHOX2-204ENST00000483851 GUCY2CP25092 1073 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 ANKRD23Q86SG2 305 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 BANK1Q8NDB2 785 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 COBLO75128 1261 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 CELF2O95319 508 aaKnown RBP29.08■■■□□ 2.25
SHOX2-204ENST00000483851 COPB1P53618 953 aaKnown RBP29.08■■■□□ 2.25
SHOX2-204ENST00000483851 PSMC5P62195 406 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 CNTN2Q02246 1040 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 PCDHA10Q9Y5I2 948 aa29.08■■■□□ 2.25
SHOX2-204ENST00000483851 ARHGEF35A5YM69 484 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 CCNE2O96020 404 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 ERVK-9P63128 1117 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 ERVK-24P63145 666 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 PPP4R3CPQ6ZMV5 832 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 KCND1Q9NSA2 647 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 ASTN1O14525 1302 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 N4BP3O15049 544 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 SFPQP23246 707 aaKnown RBP eCLIP29.06■■■□□ 2.24
SHOX2-204ENST00000483851 PBX1P40424 430 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 ZNF131P52739 623 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 TBX2Q13207 712 aaPredicted RBP29.06■■■□□ 2.24
SHOX2-204ENST00000483851 KCTD2Q14681 263 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 ZCWPW2Q504Y3 356 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 TIPINQ9BVW5 301 aa29.06■■■□□ 2.24
SHOX2-204ENST00000483851 ITIH6Q6UXX5 1313 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 CCL15-CCL14A0A0B4J2E2 113 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 SOWAHBA6NEL2 793 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 DCAF8L1A6NGE4 600 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 DYNC1I1O14576 645 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 NRDCO43847 1150 aa29.05■■■□□ 2.24
SHOX2-204ENST00000483851 PEX10O60683 326 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms