RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 HTRA4P83105 476 aaPredicted RBP22.63■■□□□ 1.21
HPS4-213ENST00000483631 TGS1Q96RS0 853 aaKnown RBP22.63■■□□□ 1.21
HPS4-213ENST00000483631 RNF26Q9BY78 433 aaPredicted RBP22.63■■□□□ 1.21
HPS4-213ENST00000483631 C6orf50Q9HD87 102 aa22.63■■□□□ 1.21
HPS4-213ENST00000483631 LCHNA4D1U4 455 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 EPOPA6NHQ4 379 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 ARP10275 920 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 ACTR2P61160 394 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 MRPS5P82675 430 aaKnown RBP22.62■■□□□ 1.21
HPS4-213ENST00000483631 CCDC85BQ15834 202 aaPredicted RBP22.62■■□□□ 1.21
HPS4-213ENST00000483631 PKN1Q16512 942 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.62■■□□□ 1.21
HPS4-213ENST00000483631 SP7Q8TDD2 431 aaPredicted RBP22.62■■□□□ 1.21
HPS4-213ENST00000483631 PGBD1Q96JS3 809 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 PCYT2Q99447 389 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 CERS4Q9HA82 394 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 PRDM6Q9NQX0 595 aa22.62■■□□□ 1.21
HPS4-213ENST00000483631 COL4A4P53420 1690 aaPredicted RBP22.62■■□□□ 1.21
HPS4-213ENST00000483631 LINC01553A4QN01 128 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 IFNAR1P17181 557 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 MARK3P27448 753 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 ZNF76P36508 570 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 AKAP17AQ02040 695 aaKnown RBP22.61■■□□□ 1.21
HPS4-213ENST00000483631 ITGB3BPQ13352 177 aaPredicted RBP22.61■■□□□ 1.21
HPS4-213ENST00000483631 NTRK3Q16288 839 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 MARCH8Q5T0T0 291 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 FAM43BQ6ZT52 329 aaPredicted RBP22.61■■□□□ 1.21
HPS4-213ENST00000483631 TMCO2Q7Z6W1 182 aaPredicted RBP22.61■■□□□ 1.21
HPS4-213ENST00000483631 MYOCDQ8IZQ8 938 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 REXO1Q8N1G1 1221 aaKnown RBP22.61■■□□□ 1.21
HPS4-213ENST00000483631 BICD2Q8TD16 824 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 TOP1MTQ969P6 601 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 ASB2Q96Q27 587 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 IFIH1Q9BYX4 1025 aaKnown RBP22.61■■□□□ 1.21
HPS4-213ENST00000483631 TMEM260Q9NX78 707 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 SQORQ9Y6N5 450 aa22.61■■□□□ 1.21
HPS4-213ENST00000483631 IGKV6D-21A0A0A0MT36 114 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 RFXAPO00287 272 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 LPXNO60711 386 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 CHRNA1P02708 482 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 NEFLP07196 543 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 STAT5BP51692 787 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 SETQ01105 290 aaPredicted RBP22.6■■□□□ 1.21
HPS4-213ENST00000483631 MGAT3Q09327 533 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 GRB10Q13322 594 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 RUFY4Q6ZNE9 571 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 RUFY3Q7L099 469 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 CCDC148Q8NFR7 591 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 SAMD11Q96NU1 681 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 TM6SF1Q9BZW5 370 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 ZSWIM6Q9HCJ5 1215 aa22.6■■□□□ 1.21
HPS4-213ENST00000483631 MYH9P35579 1960 aaKnown RBP22.59■■□□□ 1.21
HPS4-213ENST00000483631 INSRRP14616 1297 aa22.59■■□□□ 1.21
HPS4-213ENST00000483631 AAK1Q2M2I8 961 aa22.59■■□□□ 1.21
HPS4-213ENST00000483631 JAKMIP3Q5VZ66 844 aa22.59■■□□□ 1.21
HPS4-213ENST00000483631 PLA2G4DQ86XP0 818 aa22.59■■□□□ 1.21
HPS4-213ENST00000483631 IGLV3-22A0A075B6J6 115 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.58■■□□□ 1.21
HPS4-213ENST00000483631 FAM86B1E9PN63 330 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 FAM86B2P0C5J1 330 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 PDIA3P30101 505 aaKnown RBP22.58■■□□□ 1.21
HPS4-213ENST00000483631 PLCB4Q15147 1175 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 SH3GLB2Q9NR46 395 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 TBC1D22BQ9NU19 505 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 COG5Q9UP83 839 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 TRPC6Q9Y210 931 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 PCDHA2Q9Y5H9 948 aa22.58■■□□□ 1.21
HPS4-213ENST00000483631 TTC3P53804 2025 aa22.58■■□□□ 1.2
HPS4-213ENST00000483631 BRWD1Q9NSI6 2320 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 IPO5O00410 1097 aaKnown RBP22.57■■□□□ 1.2
HPS4-213ENST00000483631 CIITAP33076 1130 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 FBXO47Q5MNV8 452 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 IER5Q5VY09 327 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 FAM160B1Q5W0V3 765 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 FAM117BQ6P1L5 589 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 ABHD15Q6UXT9 468 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 FAM177A1Q8N128 213 aaPredicted RBP22.57■■□□□ 1.2
HPS4-213ENST00000483631 MICALL1Q8N3F8 863 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 DNAJB3Q8WWF6 145 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 OSBPL7Q9BZF2 842 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 SUGCTQ9HAC7 445 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 CYP46A1Q9Y6A2 500 aa22.57■■□□□ 1.2
HPS4-213ENST00000483631 SPTBN5Q9NRC6 3674 aaKnown RBP22.57■■□□□ 1.2
HPS4-213ENST00000483631 RALGAPA2Q2PPJ7 1873 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 COL1A2P08123 1366 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 POTEB3A0JP26 581 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 DHX15O43143 795 aaKnown RBP22.56■■□□□ 1.2
HPS4-213ENST00000483631 MRPS6P82932 125 aaKnown RBP22.56■■□□□ 1.2
HPS4-213ENST00000483631 LPIN1Q14693 890 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 POTEBQ6S5H4 581 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 TSHZ1Q6ZSZ6 1077 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 SPRED2Q7Z698 418 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 NME8Q8N427 588 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 PHKBQ93100 1093 aa22.56■■□□□ 1.2
HPS4-213ENST00000483631 ZNF274Q96GC6 653 aaPredicted RBP22.56■■□□□ 1.2
HPS4-213ENST00000483631 LOXHD1Q8IVV2 1947 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 SMIM35A0A1B0GVV1 85 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 HBP1O60381 514 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 CCNE2O96020 404 aa22.55■■□□□ 1.2
HPS4-213ENST00000483631 GHRP10912 638 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms