RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 EIF2AK2P19525 551 aaKnown RBP14.66□□□□□ -0.06
CPNE1-225ENST00000483495 KRT9P35527 623 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 ITGB3BPQ13352 177 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-225ENST00000483495 MTMR1Q13613 665 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 BAATQ14032 418 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-225ENST00000483495 VGLL4Q14135 290 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 TMEM132BQ14DG7 1078 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 FKBP15Q5T1M5 1219 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
CPNE1-225ENST00000483495 RAD9BQ6WBX8 426 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 KIF18AQ8NI77 898 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 PIGOQ8TEQ8 1089 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
CPNE1-225ENST00000483495 NDST4Q9H3R1 872 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 TBC1D22BQ9NU19 505 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
CPNE1-225ENST00000483495 PES1O00541 588 aaKnown RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 DYNC1I1O14576 645 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 TBCAO75347 108 aaKnown RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 CASP5P51878 434 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 SYCP1Q15431 976 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 TRIM65Q6PJ69 517 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 OR8K1Q8NGG5 319 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 LXNQ9BS40 222 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 TEX13BQ9BXU2 312 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 TRAF3IP3Q9Y228 551 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 LUC7L2Q9Y383 392 aaKnown RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 A0A1W2PQJ5 194 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 SPDYE16A6NNV3 312 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 RSPH10B2B2RC85 870 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 TRAF5O00463 557 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 LYPLA2O95372 231 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 P4HBP07237 508 aaKnown RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 RSPH10BP0C881 870 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ZNF131P52739 623 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ETF1P62495 437 aaKnown RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ERVK-24P63145 666 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 MTF1Q14872 753 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 KNOP1Q1ED39 458 aaKnown RBP14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ARHGEF16Q5VV41 709 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 CYP26C1Q6V0L0 522 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 MIER3Q7Z3K6 550 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 VSIG10LQ86VR7 867 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 NELFCDQ8IXH7 590 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ZHX3Q9H4I2 956 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ADGRG1Q9Y653 693 aa14.65□□□□□ -0.06
CPNE1-225ENST00000483495 ADM5C9JUS6 153 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 CCDC175P0C221 793 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 GUCY2CP25092 1073 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 HOXD13P35453 343 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 C9orf131Q5VYM1 1079 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
CPNE1-225ENST00000483495 ZSWIM4Q9H7M6 989 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 ODF2LQ9ULJ1 636 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 WDR90Q96KV7 1748 aa14.64□□□□□ -0.07
CPNE1-225ENST00000483495 PDXKO00764 312 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 ZBTB39O15060 712 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 EIF3DO15371 548 aaKnown RBP eCLIP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 MAFGO15525 162 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 PPP1R12BO60237 982 aaPredicted RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 PRKG1Q13976 671 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 MEA1Q16626 185 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 ZNF592Q92610 1267 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 ACAD9Q9H845 621 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 POLR2AP24928 1970 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 PHLPP2Q6ZVD8 1323 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 COL11A1P12107 1806 aaPredicted RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 DDX39AO00148 427 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 CTIFO43310 598 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 FAM13AO94988 1023 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 NR3C2P08235 984 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 MYBP10242 640 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 MYCLP12524 364 aaPredicted RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 TRIM21P19474 475 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 CCND2P30279 289 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 KLK7P49862 253 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 ZBED6P86452 979 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 DLK2Q6UY11 383 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 SYT10Q6XYQ8 523 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 TRIM59Q8IWR1 403 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 BANK1Q8NDB2 785 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 NSUN6Q8TEA1 469 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 GPRASP2Q96D09 838 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 INPP4AQ96PE3 977 aaPredicted RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 PURBQ96QR8 312 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 FIZ1Q96SL8 496 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 DESI2Q9BSY9 194 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 MRPL44Q9H9J2 332 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 PARVGQ9HBI0 331 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 CYP39A1Q9NYL5 469 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 DBR1Q9UK59 544 aaKnown RBP14.63□□□□□ -0.07
CPNE1-225ENST00000483495 CSADQ9Y600 493 aa14.63□□□□□ -0.07
CPNE1-225ENST00000483495 CETN3O15182 167 aa14.62□□□□□ -0.07
CPNE1-225ENST00000483495 ADAM9Q13443 819 aa14.62□□□□□ -0.07
CPNE1-225ENST00000483495 USP50Q70EL3 339 aaPredicted RBP14.62□□□□□ -0.07
CPNE1-225ENST00000483495 RDM1Q8NG50 284 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms