RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	SAFB	Q15424	915 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	TRIM71	Q2Q1W2	868 aa	Known RBP	13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	PIK3AP1	Q6ZUJ8	805 aa		13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	ZNF365	Q70YC5	407 aa		13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	DHX38	Q92620	1227 aa	Known RBP	13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	SCLY	Q96I15	445 aa		13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	RNPC3	Q96LT9	517 aa	Known RBP	13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	DDX25	Q9UHL0	483 aa	Known RBP	13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	PCDHA10	Q9Y5I2	948 aa		13.99	□□□□□ -0.17
MRPL55-229	ENST00000483159	WDR64	B1ANS9	1081 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	BTBD18	B2RXH4	712 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	DDX39A	O00148	427 aa	Known RBP	13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	BACH1	O14867	736 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	TBX3	O15119	743 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	TREH	O43280	583 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	GAS7	O60861	476 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	PSMD10	O75832	226 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	RPLP2	P05387	115 aa	Known RBP	13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	PSAP	P07602	524 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	ACR	P10323	421 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	MARK3	P27448	753 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	SFN	P31947	248 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	PPFIA1	Q13136	1202 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	NR5A1	Q13285	461 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	LETM2	Q2VYF4	491 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	RASIP1	Q5U651	963 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	LRCH2	Q5VUJ6	765 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	SWSAP1	Q6NVH7	229 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	TAF2	Q6P1X5	1199 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	LRRC8D	Q7L1W4	858 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	RPAIN	Q86UA6	219 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	DIS3L2	Q8IYB7	885 aa	Known RBP	13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	FAM184A	Q8NB25	1140 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	FBXO18	Q8NFZ0	1043 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	LMBR1	Q8WVP7	490 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	HERVK_113	Q902F9	699 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	TMX3	Q96JJ7	454 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	C8orf76	Q96K31	380 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	FAM20A	Q96MK3	541 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	MTIF3	Q9H2K0	278 aa	Known RBP	13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	ZNF302	Q9NR11	478 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	KIF3A	Q9Y496	699 aa		13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.98	□□□□□ -0.17
MRPL55-229	ENST00000483159	POTEB3	A0JP26	581 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	SOX1	O00570	391 aa	Predicted RBP	13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	INSRR	P14616	1297 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	JAK3	P52333	1124 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	SMAD3	P84022	425 aa	Known RBP	13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	PLCB4	Q15147	1175 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	GRIK4	Q16099	956 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	POTEB	Q6S5H4	581 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	RDM1	Q8NG50	284 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	ETNPPL	Q8TBG4	499 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	VWCE	Q96DN2	955 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	TEKT3	Q9BXF9	490 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	DISC1	Q9NRI5	854 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	SAMM50	Q9Y512	469 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	MYH7B	A7E2Y1	1941 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	TRIOBP	Q9H2D6	2365 aa		13.97	□□□□□ -0.17
MRPL55-229	ENST00000483159	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	RSPH10B2	B2RC85	870 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	HBP1	O60381	514 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	CCNT1	O60563	726 aa	Known RBP	13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	RSPH10B	P0C881	870 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	ACTN1	P12814	892 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	THPO	P40225	353 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	EARS2	Q5JPH6	523 aa	Known RBP	13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	MARCH8	Q5T0T0	291 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	ZNF618	Q5T7W0	954 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	PDXDC2P	Q6P474	469 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	TRAF7	Q6Q0C0	670 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	B3GNT9	Q6UX72	402 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	RSPH3	Q86UC2	560 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	ATP8B4	Q8TF62	1192 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	WNT8B	Q93098	351 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	UIMC1	Q96RL1	719 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	FOXP1	Q9H334	677 aa	Predicted RBP	13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	KCNMB3	Q9NPA1	279 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	TUBE1	Q9UJT0	475 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	TRPC6	Q9Y210	931 aa		13.96	□□□□□ -0.17
MRPL55-229	ENST00000483159	SLC37A4	O43826	429 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	CD2BP2	O95400	341 aa	Known RBP	13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	CXCL10	P02778	98 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	GPNMB	Q14956	572 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	ZNF484	Q5JVG2	852 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	PPP4R3CP	Q6ZMV5	832 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	DEFB128	Q7Z7B8	93 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	SLFN12	Q8IYM2	578 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	BBX	Q8WY36	941 aa	Predicted RBP	13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	LRCH3	Q96II8	777 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	PCDHA2	Q9Y5H9	948 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	COL1A2	P08123	1366 aa		13.95	□□□□□ -0.18
MRPL55-229	ENST00000483159	MARCH6	O60337	910 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	BAIAP3	O94812	1187 aa		13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	BAG4	O95429	457 aa	Known RBP	13.94	□□□□□ -0.18
MRPL55-229	ENST00000483159	ATP4A	P20648	1035 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms