RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 KRT2P35908 639 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 STAT5BP51692 787 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 TRIM29Q14134 588 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 RPAINQ86UA6 219 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 SLC5A5Q92911 643 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 SETD4Q9NVD3 440 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 TET1Q8NFU7 2136 aa17.12■□□□□ 0.33
COL16A1-213ENST00000482910 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 MBLAC1A4D2B0 266 aaPredicted RBP17.11■□□□□ 0.33
COL16A1-213ENST00000482910 RRN3P2A6NIE6 340 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 DDX39AO00148 427 aaKnown RBP17.11■□□□□ 0.33
COL16A1-213ENST00000482910 RPLP2P05387 115 aaKnown RBP17.11■□□□□ 0.33
COL16A1-213ENST00000482910 MCM2P49736 904 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 INF2Q27J81 1249 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 FAM109BQ6ICB4 259 aaPredicted RBP17.11■□□□□ 0.33
COL16A1-213ENST00000482910 TAF2Q6P1X5 1199 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 TNFRSF25Q93038 417 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 WNT8BQ93098 351 aa17.11■□□□□ 0.33
COL16A1-213ENST00000482910 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-213ENST00000482910 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.1■□□□□ 0.33
COL16A1-213ENST00000482910 WDR64B1ANS9 1081 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 DTNBO60941 627 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 TDP2O95551 362 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 CXCL10P02778 98 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 ACTN1P12814 892 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 MARK3P27448 753 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 GRIK4Q16099 956 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 KRT40Q6A162 431 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 TRAF7Q6Q0C0 670 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 DDX25Q9UHL0 483 aaKnown RBP17.1■□□□□ 0.33
COL16A1-213ENST00000482910 PCDHA10Q9Y5I2 948 aa17.1■□□□□ 0.33
COL16A1-213ENST00000482910 BACH1O14867 736 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 HBP1O60381 514 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 GAS7O60861 476 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 PSMD10O75832 226 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 PSAPP07602 524 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 SFNP31947 248 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 GPNMBQ14956 572 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 ZNF618Q5T7W0 954 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 B3GNT9Q6UX72 402 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 DEFB128Q7Z7B8 93 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-213ENST00000482910 ATP8B4Q8TF62 1192 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 TEKT3Q9BXF9 490 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 ZNF302Q9NR11 478 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 TUBE1Q9UJT0 475 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-213ENST00000482910 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 SZT2Q5T011 3432 aa17.09■□□□□ 0.33
COL16A1-213ENST00000482910 COL1A2P08123 1366 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 POTEB3A0JP26 581 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 TBX3O15119 743 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 BAIAP3O94812 1187 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 INSRRP14616 1297 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 THPOP40225 353 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 JAK3P52333 1124 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 NR5A1Q13285 461 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 MARCH8Q5T0T0 291 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 POTEBQ6S5H4 581 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 DIS3L2Q8IYB7 885 aaKnown RBP17.08■□□□□ 0.32
COL16A1-213ENST00000482910 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 TRPC6Q9Y210 931 aa17.08■□□□□ 0.32
COL16A1-213ENST00000482910 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 RSPH10B2B2RC85 870 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 BTBD18B2RXH4 712 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 NBNO60934 754 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 RSPH10BP0C881 870 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL16A1-213ENST00000482910 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
COL16A1-213ENST00000482910 SWSAP1Q6NVH7 229 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 CNKSR3Q6P9H4 555 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 RSPH3Q86UC2 560 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-213ENST00000482910 FTOQ9C0B1 505 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL16A1-213ENST00000482910 DISC1Q9NRI5 854 aa17.07■□□□□ 0.32
COL16A1-213ENST00000482910 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-213ENST00000482910 SLC37A4O43826 429 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 CCNT1O60563 726 aaKnown RBP17.06■□□□□ 0.32
COL16A1-213ENST00000482910 EFCAB14O75071 495 aa17.06■□□□□ 0.32
COL16A1-213ENST00000482910 MBTPS1Q14703 1052 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms