RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 BEX3Q00994 111 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 KRT79Q5XKE5 535 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 ADALQ6DHV7 355 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
CCM2-215ENST00000482714 GLT1D1Q96MS3 346 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 UIMC1Q96RL1 719 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 C16orf70Q9BSU1 422 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 TUT1Q9H6E5 874 aaKnown RBP17.23■□□□□ 0.35
CCM2-215ENST00000482714 ZNF302Q9NR11 478 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 PHF24Q9UPV7 400 aa17.23■□□□□ 0.35
CCM2-215ENST00000482714 BACH1O14867 736 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 SLITRK3O94933 977 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 LYPLA2O95372 231 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 F2P00734 622 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 LGALS2P05162 132 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 UBA7P41226 1012 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 PSMC5P62195 406 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 SP4Q02446 784 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 NCAPH2Q6IBW4 605 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 C4orf19Q8IY42 314 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 GLG1Q92896 1179 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 EIF2AK1Q9BQI3 630 aaKnown RBP17.22■□□□□ 0.35
CCM2-215ENST00000482714 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 ZSWIM4Q9H7M6 989 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 NRBP2Q9NSY0 501 aa17.22■□□□□ 0.35
CCM2-215ENST00000482714 CENPFP49454 3210 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 MYADML2A6NDP7 307 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 HAS3O00219 553 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 CHMP2AO43633 222 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 ME1P48163 572 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 FAM167AQ96KS9 214 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 PCYT2Q99447 389 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
CCM2-215ENST00000482714 POTEMA6NI47 508 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 SORBS3O60504 671 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 MYL3P08590 195 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 PTGS1P23219 599 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 PTPN11Q06124 597 aaPredicted RBP17.2■□□□□ 0.34
CCM2-215ENST00000482714 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
CCM2-215ENST00000482714 UTP14CQ5TAP6 766 aaKnown RBP17.2■□□□□ 0.34
CCM2-215ENST00000482714 PDXDC2PQ6P474 469 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 CCDC60Q8IWA6 550 aaPredicted RBP17.2■□□□□ 0.34
CCM2-215ENST00000482714 GBP4Q96PP9 640 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 GABBR1Q9UBS5 961 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 PPME1Q9Y570 386 aa17.2■□□□□ 0.34
CCM2-215ENST00000482714 HBP1O60381 514 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 TXLNAP40222 546 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 RGS19P49795 217 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 XKR3Q5GH77 459 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 HYIQ5T013 277 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 CXCL17Q6UXB2 119 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 OTUD6AQ7L8S5 288 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 CATSPER3Q86XQ3 398 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
CCM2-215ENST00000482714 KAT2BQ92831 832 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 NACC1Q96RE7 527 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 PYM1Q9BRP8 204 aaKnown RBP17.19■□□□□ 0.34
CCM2-215ENST00000482714 CCDC39Q9UFE4 941 aa17.19■□□□□ 0.34
CCM2-215ENST00000482714 IGSF9BQ9UPX0 1349 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
CCM2-215ENST00000482714 SPATA31C1P0DKV0 1188 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 CMA1P23946 247 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 MNX1P50219 401 aaPredicted RBP17.18■□□□□ 0.34
CCM2-215ENST00000482714 IRX5P78411 483 aaPredicted RBP17.18■□□□□ 0.34
CCM2-215ENST00000482714 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 NFRKBQ6P4R8 1299 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 NECAB2Q7Z6G3 386 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 SESTD1Q86VW0 696 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 TPH2Q8IWU9 490 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 ATP8B4Q8TF62 1192 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 CALML4Q96GE6 196 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 DYDC2Q96IM9 177 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
CCM2-215ENST00000482714 STARD7Q9NQZ5 370 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 TELO2Q9Y4R8 837 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 MYH15Q9Y2K3 1946 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 TCHHQ07283 1943 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 RRN3P2A6NIE6 340 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 GNAT1P11488 350 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 COL6A1P12109 1028 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
CCM2-215ENST00000482714 PSEN2P49810 448 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 KIAA0753Q2KHM9 967 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 CABP7Q86V35 215 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 VTI1AQ96AJ9 217 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
CCM2-215ENST00000482714 ANKEF1Q9NU02 776 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
CCM2-215ENST00000482714 RGL1Q9NZL6 768 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms