RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 FUT8Q9BYC5 575 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 SPATC1LQ9H0A9 340 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 KBTBD4Q9NVX7 518 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 KIAA1217Q5T5P2 1943 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 CCL15-CCL14A0A0B4J2E2 113 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
APTX-225ENST00000482687 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
APTX-225ENST00000482687 CNTN2Q02246 1040 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 CCL15Q16663 113 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 PCNX4Q63HM2 1172 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 KLHL10Q6JEL2 608 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 TRMT44Q8IYL2 757 aaKnown RBP11.55□□□□□ -0.56
APTX-225ENST00000482687 RAD54LQ92698 747 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 TACO1Q9BSH4 297 aaKnown RBP11.55□□□□□ -0.56
APTX-225ENST00000482687 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
APTX-225ENST00000482687 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 UNC45AQ9H3U1 944 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 RBPJLQ9UBG7 517 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 UBIAD1Q9Y5Z9 338 aa11.55□□□□□ -0.56
APTX-225ENST00000482687 TESPA1A2RU30 521 aaPredicted RBP11.54□□□□□ -0.56
APTX-225ENST00000482687 MYMKA6NI61 221 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 MAP2K7O14733 419 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 SORBS3O60504 671 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 GAS7O60861 476 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 PSMD10O75832 226 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
APTX-225ENST00000482687 STX17P56962 302 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 PSMC6P62333 389 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 SATB1Q01826 763 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 FSTL1Q12841 308 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 BRD3Q15059 726 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 WDR78Q5VTH9 848 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 SV2BQ7L1I2 683 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 OTOP1Q7RTM1 612 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 DYMQ7RTS9 669 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 CATSPER3Q86XQ3 398 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 RIOX2Q8IUF8 465 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 LARP4BQ92615 738 aaKnown RBP11.54□□□□□ -0.56
APTX-225ENST00000482687 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 MAP3K20Q9NYL2 800 aaKnown RBP11.54□□□□□ -0.56
APTX-225ENST00000482687 MAPK8IP1Q9UQF2 711 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 GDAQ9Y2T3 454 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
APTX-225ENST00000482687 ZNFX1Q9P2E3 1918 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 NPHP3-ACAD11A0A0J9YXS1 232 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 CCDC151A5D8V7 595 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 IPO5O00410 1097 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 KLRC4O43908 158 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 NR3C2P08235 984 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ERCC3P19447 782 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ASIC1P78348 528 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ITGB3BPQ13352 177 aaPredicted RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 CTTNQ14247 550 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 NCAPHQ15003 741 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 CHST13Q8NET6 341 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 DYDC2Q96IM9 177 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 EIF2AK1Q9BQI3 630 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 TEKT3Q9BXF9 490 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 CUEDC2Q9H467 287 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 AGO4Q9HCK5 861 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 JADE2Q9NQC1 790 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 BTBD19C9JJ37 291 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 PDHXO00330 501 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ATP9AO75110 1047 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 CCND2P30279 289 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 HUNKP57058 714 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 CACNB1Q02641 598 aaPredicted RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
APTX-225ENST00000482687 MTMR1Q13613 665 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 SAMD3Q8N6K7 520 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 MB21D1Q8N884 522 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 HNRNPLLQ8WVV9 542 aaKnown RBP11.53□□□□□ -0.56
APTX-225ENST00000482687 C7orf25Q9BPX7 421 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 TRIM9Q9C026 710 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
APTX-225ENST00000482687 ASTN1O14525 1302 aa11.52□□□□□ -0.56
APTX-225ENST00000482687 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.56
APTX-225ENST00000482687 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms