RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TDO2P48775 406 aa8.8□□□□□ -1
SNX13-208ENST00000482558 ST13P50502 369 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 BRD3Q15059 726 aa8.8□□□□□ -1
SNX13-208ENST00000482558 STK38Q15208 465 aa8.8□□□□□ -1
SNX13-208ENST00000482558 SAFBQ15424 915 aaKnown RBP eCLIP8.8□□□□□ -1
SNX13-208ENST00000482558 ZRSR1Q15695 479 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 TMEM67Q5HYA8 995 aa8.8□□□□□ -1
SNX13-208ENST00000482558 RNF43Q68DV7 783 aa8.8□□□□□ -1
SNX13-208ENST00000482558 APOA5Q6Q788 366 aa8.8□□□□□ -1
SNX13-208ENST00000482558 PI16Q6UXB8 463 aa8.8□□□□□ -1
SNX13-208ENST00000482558 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
SNX13-208ENST00000482558 KRT26Q7Z3Y9 468 aa8.8□□□□□ -1
SNX13-208ENST00000482558 NCAPG2Q86XI2 1143 aa8.8□□□□□ -1
SNX13-208ENST00000482558 IGDCC4Q8TDY8 1250 aa8.8□□□□□ -1
SNX13-208ENST00000482558 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 MRPS27Q92552 414 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 ESR2Q92731 530 aa8.8□□□□□ -1
SNX13-208ENST00000482558 NSUN5Q96P11 429 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 BRIP1Q9BX63 1249 aa8.8□□□□□ -1
SNX13-208ENST00000482558 SEC31BQ9NQW1 1179 aa8.8□□□□□ -1
SNX13-208ENST00000482558 ANO10Q9NW15 660 aa8.8□□□□□ -1
SNX13-208ENST00000482558 TMEM260Q9NX78 707 aa8.8□□□□□ -1
SNX13-208ENST00000482558 SWAP70Q9UH65 585 aa8.8□□□□□ -1
SNX13-208ENST00000482558 SLC4A4Q9Y6R1 1079 aa8.8□□□□□ -1
SNX13-208ENST00000482558 MYH14Q7Z406 1995 aaKnown RBP8.8□□□□□ -1
SNX13-208ENST00000482558 MYH15Q9Y2K3 1946 aa8.8□□□□□ -1
SNX13-208ENST00000482558 NHSQ6T4R5 1651 aa8.79□□□□□ -1
SNX13-208ENST00000482558 CCDC85CA6NKD9 419 aa8.79□□□□□ -1
SNX13-208ENST00000482558 GSG1L2A8MUP6 293 aa8.79□□□□□ -1
SNX13-208ENST00000482558 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
SNX13-208ENST00000482558 GIPC1O14908 333 aa8.79□□□□□ -1
SNX13-208ENST00000482558 PPP6R2O75170 966 aa8.79□□□□□ -1
SNX13-208ENST00000482558 OFD1O75665 1012 aa8.79□□□□□ -1
SNX13-208ENST00000482558 ADCY5O95622 1261 aa8.79□□□□□ -1
SNX13-208ENST00000482558 IFNAR1P17181 557 aa8.79□□□□□ -1
SNX13-208ENST00000482558 LIG1P18858 919 aa8.79□□□□□ -1
SNX13-208ENST00000482558 ME1P48163 572 aa8.79□□□□□ -1
SNX13-208ENST00000482558 RPS8P62241 208 aaKnown RBP8.79□□□□□ -1
SNX13-208ENST00000482558 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
SNX13-208ENST00000482558 HYAL2Q12891 473 aa8.79□□□□□ -1
SNX13-208ENST00000482558 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
SNX13-208ENST00000482558 PPP2R5AQ15172 486 aa8.79□□□□□ -1
SNX13-208ENST00000482558 STX1AQ16623 288 aa8.79□□□□□ -1
SNX13-208ENST00000482558 CCDC178Q5BJE1 867 aa8.79□□□□□ -1
SNX13-208ENST00000482558 NBPF5PQ86XG9 351 aaPredicted RBP8.79□□□□□ -1
SNX13-208ENST00000482558 TBC1D10CQ8IV04 446 aa8.79□□□□□ -1
SNX13-208ENST00000482558 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
SNX13-208ENST00000482558 ELOA2Q8IYF1 753 aaPredicted RBP8.79□□□□□ -1
SNX13-208ENST00000482558 LILRB2Q8N423 598 aa8.79□□□□□ -1
SNX13-208ENST00000482558 LINC00116Q8NCU8 138 aa8.79□□□□□ -1
SNX13-208ENST00000482558 HNRNPLLQ8WVV9 542 aaKnown RBP8.79□□□□□ -1
SNX13-208ENST00000482558 CCDC34Q96HJ3 373 aa8.79□□□□□ -1
SNX13-208ENST00000482558 PGBD1Q96JS3 809 aa8.79□□□□□ -1
SNX13-208ENST00000482558 TIGD1Q96MW7 591 aa8.79□□□□□ -1
SNX13-208ENST00000482558 SPON2Q9BUD6 331 aa8.79□□□□□ -1
SNX13-208ENST00000482558 C7orf69Q9H7B7 122 aa8.79□□□□□ -1
SNX13-208ENST00000482558 NCOA5Q9HCD5 579 aaKnown RBP8.79□□□□□ -1
SNX13-208ENST00000482558 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
SNX13-208ENST00000482558 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
SNX13-208ENST00000482558 MORC2Q9Y6X9 1032 aaPredicted RBP8.79□□□□□ -1
SNX13-208ENST00000482558 GOLGA8AA7E2F4 631 aa8.78□□□□□ -1
SNX13-208ENST00000482558 GOLGA6L19H0YKK7 550 aa8.78□□□□□ -1
SNX13-208ENST00000482558 IFRD1O00458 451 aaPredicted RBP8.78□□□□□ -1
SNX13-208ENST00000482558 SPTLC2O15270 562 aa8.78□□□□□ -1
SNX13-208ENST00000482558 WNT11O96014 354 aa8.78□□□□□ -1
SNX13-208ENST00000482558 TPM2P07951 284 aa8.78□□□□□ -1
SNX13-208ENST00000482558 CYP7A1P22680 504 aa8.78□□□□□ -1
SNX13-208ENST00000482558 CMA1P23946 247 aa8.78□□□□□ -1
SNX13-208ENST00000482558 EPHB1P54762 984 aa8.78□□□□□ -1
SNX13-208ENST00000482558 PIP4K2BP78356 416 aa8.78□□□□□ -1
SNX13-208ENST00000482558 HLTFQ14527 1009 aaKnown RBP eCLIP8.78□□□□□ -1
SNX13-208ENST00000482558 WTAPQ15007 396 aa8.78□□□□□ -1
SNX13-208ENST00000482558 BRDTQ58F21 947 aaPredicted RBP8.78□□□□□ -1
SNX13-208ENST00000482558 CHST3Q7LGC8 479 aa8.78□□□□□ -1
SNX13-208ENST00000482558 KIAA0825Q8IV33 1275 aa8.78□□□□□ -1
SNX13-208ENST00000482558 LINC00301Q8NCQ3 95 aa8.78□□□□□ -1
SNX13-208ENST00000482558 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
SNX13-208ENST00000482558 TDRD7Q8NHU6 1098 aaKnown RBP8.78□□□□□ -1
SNX13-208ENST00000482558 UTP4Q969X6 686 aaKnown RBP8.78□□□□□ -1
SNX13-208ENST00000482558 FAM46AQ96IP4 442 aaKnown RBP8.78□□□□□ -1
SNX13-208ENST00000482558 USP28Q96RU2 1077 aa8.78□□□□□ -1
SNX13-208ENST00000482558 DNAJC7Q99615 494 aa8.78□□□□□ -1
SNX13-208ENST00000482558 UBAC1Q9BSL1 405 aa8.78□□□□□ -1
SNX13-208ENST00000482558 ALG1Q9BT22 464 aa8.78□□□□□ -1
SNX13-208ENST00000482558 CCDC113Q9H0I3 377 aa8.78□□□□□ -1
SNX13-208ENST00000482558 LY9Q9HBG7 655 aa8.78□□□□□ -1
SNX13-208ENST00000482558 JADE2Q9NQC1 790 aa8.78□□□□□ -1
SNX13-208ENST00000482558 ATP8A2Q9NTI2 1148 aa8.78□□□□□ -1
SNX13-208ENST00000482558 RBM28Q9NW13 759 aaKnown RBP8.78□□□□□ -1
SNX13-208ENST00000482558 RAI14Q9P0K7 980 aa8.78□□□□□ -1
SNX13-208ENST00000482558 HOOK1Q9UJC3 728 aaKnown RBP8.78□□□□□ -1
SNX13-208ENST00000482558 MINPP1Q9UNW1 487 aa8.78□□□□□ -1
SNX13-208ENST00000482558 CEP131Q9UPN4 1083 aa8.78□□□□□ -1
SNX13-208ENST00000482558 TRIM33Q9UPN9 1127 aa8.78□□□□□ -1
SNX13-208ENST00000482558 LEMD3Q9Y2U8 911 aa8.78□□□□□ -1
SNX13-208ENST00000482558 THSD7AQ9UPZ6 1657 aa8.78□□□□□ -1
SNX13-208ENST00000482558 COL24A1Q17RW2 1714 aa8.77□□□□□ -1
SNX13-208ENST00000482558 PRR19A6NJB7 356 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 FAM177BA6PVY3 158 aa8.77□□□□□ -1.01
SNX13-208ENST00000482558 B4E1Z4 1266 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms