RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ANKRD2Q9GZV1 360 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 KIF4AO95239 1232 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 RASA1P20936 1047 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 FLT3P36888 993 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
VPS52-218ENST00000482399 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 BAP1Q92560 729 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 GLG1Q92896 1179 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 SH3GL2Q99962 352 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 SLC40A1Q9NP59 571 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 RIC8AQ9NPQ8 531 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 SAMD15Q9P1V8 674 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 AMFRQ9UKV5 643 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 DCDC2CA8MYV0 355 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 TLR2O60603 784 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 GSTO1P78417 241 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 NAB2Q15742 525 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 GLYCTKQ8IVS8 523 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 METTL13Q8N6R0 699 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 GCNT4Q9P109 453 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 SLIT3O75094 1523 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 CHUKO15111 745 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 RGS16O15492 202 aaPredicted RBP13.87□□□□□ -0.19
VPS52-218ENST00000482399 SHOX2O60902 331 aaPredicted RBP13.87□□□□□ -0.19
VPS52-218ENST00000482399 GJC1P36383 396 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 LMBR1Q8WVP7 490 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 CTTNBP2NLQ9P2B4 639 aa13.87□□□□□ -0.19
VPS52-218ENST00000482399 GSTTP1A0A1W2PQM5 241 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 PRPHP41219 470 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 SCNN1DP51172 638 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 KDM7AQ6ZMT4 941 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 RPGRQ92834 1020 aaKnown RBP13.86□□□□□ -0.19
VPS52-218ENST00000482399 FMO2Q99518 471 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 NUCKS1Q9H1E3 243 aaKnown RBP13.86□□□□□ -0.19
VPS52-218ENST00000482399 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
VPS52-218ENST00000482399 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
VPS52-218ENST00000482399 PVALEFA0A1B0GWK0 134 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 FAM107AO95990 144 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 EPB41P11171 864 aaKnown RBP13.86□□□□□ -0.19
VPS52-218ENST00000482399 PPP2R2AP63151 447 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 NFIXQ14938 502 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 IQCKQ8N0W5 287 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 SLC24A3Q9HC58 644 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 FLT1P17948 1338 aa13.86□□□□□ -0.19
VPS52-218ENST00000482399 SSU72P8A0A1W2PR75 194 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 OPLAHO14841 1288 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 TNFAIP3P21580 790 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 STAT1P42224 750 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 UBXN2AP68543 259 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 QPCTQ16769 361 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 ZNF804AQ7Z570 1209 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 SFR1Q86XK3 245 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 PIGOQ8TEQ8 1089 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 CUL5Q93034 780 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 CAVIN3Q969G5 261 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 IQCDQ96DY2 449 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 RNF14Q9UBS8 474 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 NEBLO76041 1014 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 ZNF746Q6NUN9 644 aaPredicted RBP13.85□□□□□ -0.19
VPS52-218ENST00000482399 EP400NLQ6ZTU2 488 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 FBXO33Q7Z6M2 555 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 PHLDB2Q86SQ0 1253 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 PURBQ96QR8 312 aaKnown RBP13.85□□□□□ -0.19
VPS52-218ENST00000482399 IKZF4Q9H2S9 585 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 OSGEPQ9NPF4 335 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 DNM3Q9UQ16 869 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 MMEP08473 750 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 TAL1P17542 331 aaPredicted RBP13.85□□□□□ -0.19
VPS52-218ENST00000482399 PEX19P40855 299 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 GTF2IP78347 998 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 ECM1Q16610 540 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 ZNF571Q7Z3V5 609 aaPredicted RBP13.85□□□□□ -0.19
VPS52-218ENST00000482399 CCDC105Q8IYK2 499 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 INTS9Q9NV88 658 aaKnown RBP13.85□□□□□ -0.19
VPS52-218ENST00000482399 ZBTB21Q9ULJ3 1066 aa13.85□□□□□ -0.19
VPS52-218ENST00000482399 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
VPS52-218ENST00000482399 FAM13AO94988 1023 aa13.84□□□□□ -0.19
VPS52-218ENST00000482399 AFPP02771 609 aaKnown RBP13.84□□□□□ -0.19
VPS52-218ENST00000482399 UCHL3P15374 230 aa13.84□□□□□ -0.19
VPS52-218ENST00000482399 PRLRP16471 622 aa13.84□□□□□ -0.19
VPS52-218ENST00000482399 TPH2Q8IWU9 490 aa13.84□□□□□ -0.19
VPS52-218ENST00000482399 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
VPS52-218ENST00000482399 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
VPS52-218ENST00000482399 DDX20Q9UHI6 824 aaKnown RBP13.84□□□□□ -0.19
VPS52-218ENST00000482399 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms