RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 WASF1Q92558 559 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 PCYT2Q99447 389 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 ZNF576Q9H609 170 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
HMGN1-213ENST00000482192 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 MBLAC1A4D2B0 266 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-213ENST00000482192 RRN3P2A6NIE6 340 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 M0R2N6 131 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 BACH1O14867 736 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 EFCAB14O75071 495 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 KCNJ6P48051 423 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 KRT76Q01546 638 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 NPY5RQ15761 445 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 ZNF746Q6NUN9 644 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-213ENST00000482192 ABHD15Q6UXT9 468 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 SMAP1Q8IYB5 467 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-213ENST00000482192 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 LENG9Q96B70 501 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 CDX2Q99626 313 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-213ENST00000482192 PHF20Q9BVI0 1012 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 PCDHA11Q9Y5I1 949 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 SZT2Q5T011 3432 aa13.48□□□□□ -0.25
HMGN1-213ENST00000482192 ABHD14A-ACY1A0A1B0GW23 586 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 LARGE1O95461 756 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 RPLP2P05387 115 aaKnown RBP13.47□□□□□ -0.25
HMGN1-213ENST00000482192 CTSHP09668 335 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 INSRRP14616 1297 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 IKBKEQ14164 716 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 PLCB4Q15147 1175 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMGN1-213ENST00000482192 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 RPAINQ86UA6 219 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 RSPH3Q86UC2 560 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 SLC28A3Q9HAS3 691 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 ZNF302Q9NR11 478 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-213ENST00000482192 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
HMGN1-213ENST00000482192 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 CCDC194A0A1B0GVG4 234 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 CYP3A7P24462 503 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 RABGGTBP53611 331 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 WDR5P61964 334 aaKnown RBP13.46□□□□□ -0.25
HMGN1-213ENST00000482192 IGBP1P78318 339 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 Q4G0T1 1027 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 FAM26DQ5JW98 314 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 SWSAP1Q6NVH7 229 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 RUFY4Q6ZNE9 571 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 HERC6Q8IVU3 1022 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-213ENST00000482192 ATP8B4Q8TF62 1192 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 RIT2Q99578 217 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 NKX2-4Q9H2Z4 354 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 YBX2Q9Y2T7 364 aaKnown RBP13.46□□□□□ -0.25
HMGN1-213ENST00000482192 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
HMGN1-213ENST00000482192 WDR64B1ANS9 1081 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 KIF28PB7ZC32 967 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 MSH4O15457 936 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 EDIL3O43854 480 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 GAS7O60861 476 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 TDP2O95551 362 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 PSAPP07602 524 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
HMGN1-213ENST00000482192 GRIN2CQ14957 1233 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 INF2Q27J81 1249 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 PLEKHG4Q58EX7 1191 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 PPP2R2DQ66LE6 453 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
HMGN1-213ENST00000482192 SEPT8Q92599 483 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 LIMCH1Q9UPQ0 1083 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 COL1A2P08123 1366 aa13.45□□□□□ -0.26
HMGN1-213ENST00000482192 HBP1O60381 514 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 DTNBO60941 627 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 CHRNA1P02708 482 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 FOSL2P15408 326 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 SFNP31947 248 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 TCTN1Q2MV58 587 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 CKAP2LQ8IYA6 745 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 DBF4BQ8NFT6 615 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 DNAJB3Q8WWF6 145 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 MYLIPQ8WY64 445 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 APBB2Q92870 758 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 MBOAT7Q96N66 472 aa13.44□□□□□ -0.26
HMGN1-213ENST00000482192 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms