RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 LINC01599Q8WXQ3 324 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 FTHL17Q9BXU8 183 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
HDAC6-224ENST00000481929 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 ZBTB5O15062 677 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 PPP1R11O60927 126 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 PPFIA3O75145 1194 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 STAM2O75886 525 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 POLR2MP0CAP2 368 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 CD52P31358 61 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 RBM10P98175 930 aaKnown RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 SP4Q02446 784 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 UBE3AQ05086 875 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 PPFIA1Q13136 1202 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 ZNF589Q86UQ0 364 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 VN1R2Q8NFZ6 395 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 NKD2Q969F2 451 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-224ENST00000481929 TUBE1Q9UJT0 475 aa17.31■□□□□ 0.36
HDAC6-224ENST00000481929 SPATA31C2B4DYI2 1134 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 FIBPO43427 364 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 SP100P23497 879 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-224ENST00000481929 MTMR3Q13615 1198 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 DUSP6Q16828 381 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 MCTP2Q6DN12 878 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 UBALD2Q8IYN6 164 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 CRIPAKQ8N1N5 446 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 ENAHQ8N8S7 591 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-224ENST00000481929 KREMEN2Q8NCW0 462 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 DNAJB3Q8WWF6 145 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 AGO3Q9H9G7 860 aaKnown RBP17.3■□□□□ 0.36
HDAC6-224ENST00000481929 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
HDAC6-224ENST00000481929 ZNF213O14771 459 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
HDAC6-224ENST00000481929 SCG2P13521 617 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 MRPS6P82932 125 aaKnown RBP17.29■□□□□ 0.36
HDAC6-224ENST00000481929 MRPS9P82933 396 aaKnown RBP17.29■□□□□ 0.36
HDAC6-224ENST00000481929 TRAF1Q13077 416 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 SEMA3FQ13275 785 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 SPOUT1Q5T280 376 aaKnown RBP17.29■□□□□ 0.36
HDAC6-224ENST00000481929 FRMD5Q7Z6J6 570 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 TMEM105Q8N8V8 129 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 MTMR8Q96EF0 704 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 AAASQ9NRG9 546 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 SORCS3Q9UPU3 1222 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 NR2E1Q9Y466 385 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 PLXNA4Q9HCM2 1894 aa17.29■□□□□ 0.36
HDAC6-224ENST00000481929 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 KLRF2D3W0D1 207 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 TECP42680 631 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 GATMP50440 423 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-224ENST00000481929 GRIK4Q16099 956 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 PDE12Q6L8Q7 609 aaKnown RBP17.28■□□□□ 0.36
HDAC6-224ENST00000481929 ANKRD54Q6NXT1 300 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 RTN4RL1Q86UN2 441 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-224ENST00000481929 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 S1PR5Q9H228 398 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 DOCK5Q9H7D0 1870 aa17.28■□□□□ 0.36
HDAC6-224ENST00000481929 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-224ENST00000481929 B4E1Z4 1266 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-224ENST00000481929 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.36
HDAC6-224ENST00000481929 TMEM184AQ6ZMB5 413 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 HOMER1Q86YM7 354 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 SENP7Q9BQF6 1050 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 TSHZ2Q9NRE2 1034 aa17.27■□□□□ 0.36
HDAC6-224ENST00000481929 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-224ENST00000481929 DCHS1Q96JQ0 3298 aa17.27■□□□□ 0.35
HDAC6-224ENST00000481929 M0QZ92 97 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 FGF18O76093 207 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 BRD1O95696 1058 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 IBSPP21815 317 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-224ENST00000481929 MARK3P27448 753 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 PAK2Q13177 524 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 IER5Q5VY09 327 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 ASTLQ6HA08 431 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-224ENST00000481929 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-224ENST00000481929 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 APOL5Q9BWW9 433 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 FAM49AQ9H0Q0 323 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-224ENST00000481929 MFSD1Q9H3U5 465 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 ERAP1Q9NZ08 941 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 DMDP11532 3685 aa17.26■□□□□ 0.35
HDAC6-224ENST00000481929 CACNA1BQ00975 2339 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 HOXB8P17481 243 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-224ENST00000481929 ERVFC1P60507 584 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 MARCH8Q5T0T0 291 aa17.25■□□□□ 0.35
HDAC6-224ENST00000481929 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
HDAC6-224ENST00000481929 LLGL2Q6P1M3 1020 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms