RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 FBXO16Q8IX29 292 aaPredicted RBP11.36□□□□□ -0.59
USP39-215ENST00000481409 DHX37Q8IY37 1157 aaKnown RBP11.36□□□□□ -0.59
USP39-215ENST00000481409 EXOC8Q8IYI6 725 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 AFAP1L1Q8TED9 768 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 RAD54LQ92698 747 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 PAGE5Q96GU1 130 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 ANKEF1Q9NU02 776 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 SRRDQ9UH36 339 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 TUBE1Q9UJT0 475 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
USP39-215ENST00000481409 KIAA1024Q9UPX6 916 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 MCM3APO60318 1980 aa11.36□□□□□ -0.59
USP39-215ENST00000481409 PVALEFA0A1B0GWK0 134 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
USP39-215ENST00000481409 CHMP2AO43633 222 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 CCNE2O96020 404 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 CYP2B6P20813 491 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 CTGFP29279 349 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 PPP1R2P41236 205 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 SARSP49591 514 aaKnown RBP11.35□□□□□ -0.59
USP39-215ENST00000481409 FLT3LGP49771 235 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 SP2Q02086 613 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 KCNB1Q14721 858 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 BRDTQ58F21 947 aaPredicted RBP11.35□□□□□ -0.59
USP39-215ENST00000481409 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 PLPPR4Q7Z2D5 763 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 SYT2Q8N9I0 419 aaPredicted RBP11.35□□□□□ -0.59
USP39-215ENST00000481409 PPTC7Q8NI37 304 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 GJA10Q969M2 543 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 DYDC2Q96IM9 177 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
USP39-215ENST00000481409 FAM167AQ96KS9 214 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 LXNQ9BS40 222 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 PANK2Q9BZ23 570 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 AZI2Q9H6S1 392 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 FAM184BQ9ULE4 1060 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
USP39-215ENST00000481409 EMSYQ7Z589 1322 aa11.35□□□□□ -0.59
USP39-215ENST00000481409 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 DDX39AO00148 427 aaKnown RBP11.34□□□□□ -0.59
USP39-215ENST00000481409 PPFIA4O75335 1185 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 LGR5O75473 907 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 PLA2G4BP0C869 781 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 ZNF865P0CJ78 1059 aaPredicted RBP11.34□□□□□ -0.59
USP39-215ENST00000481409 HOXD8P13378 290 aaPredicted RBP11.34□□□□□ -0.59
USP39-215ENST00000481409 AKR1A1P14550 325 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 DPYDQ12882 1025 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 CAMK4Q16566 473 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 TPH2Q8IWU9 490 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 SPATA33Q96N06 139 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 TRIM9Q9C026 710 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 ANO10Q9NW15 660 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 WBP1LQ9NX94 342 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 DACH1Q9UI36 760 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 KCNG1Q9UIX4 513 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
USP39-215ENST00000481409 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
USP39-215ENST00000481409 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 SYCE3A1L190 88 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 MSCO60682 206 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 KPNA6O60684 536 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 ARIH2O95376 493 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 HMGCRP04035 888 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 SLC12A3P55017 1021 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 NKX3-2P78367 333 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 HTRA3P83110 453 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 CYP4A11Q02928 519 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 TNFAIP2Q03169 654 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 PRKCZQ05513 592 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 PSMD2Q13200 908 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 STX1AQ16623 288 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 CD99L2Q8TCZ2 262 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 ZNF296Q8WUU4 475 aaPredicted RBP11.33□□□□□ -0.6
USP39-215ENST00000481409 GPR20Q99678 358 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 ARHGAP39Q9C0H5 1083 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 NAT10Q9H0A0 1025 aaKnown RBP11.33□□□□□ -0.6
USP39-215ENST00000481409 SMARCAD1Q9H4L7 1026 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 ZNF302Q9NR11 478 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 NRBP2Q9NSY0 501 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 RGL1Q9NZL6 768 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 PKD2L1Q9P0L9 805 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
USP39-215ENST00000481409 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
USP39-215ENST00000481409 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms