RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 TNFRSF25Q93038 417 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 ZNF577Q9BSK1 485 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 PBX4Q9BYU1 374 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
RAPGEF1-207ENST00000481260 IGKV6D-21A0A0A0MT36 114 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 MAFGO15525 162 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 ATG7O95352 703 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 INSRRP14616 1297 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 RBL2Q08999 1139 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 GRIK4Q16099 956 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 UGCGQ16739 394 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 CPLX2Q6PUV4 134 aaKnown RBP12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 PIK3AP1Q6ZUJ8 805 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 AFAP1L1Q8TED9 768 aa12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAPGEF1-207ENST00000481260 SPTBN5Q9NRC6 3674 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZBTB42B2RXF5 422 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 CHMP2AO43633 222 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 CDKL5O76039 1030 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 CHRNA1P02708 482 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 DNAJB2P25686 324 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 DEFB103AP81534 67 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 SWSAP1Q6NVH7 229 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 TEX2Q8IWB9 1127 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 SLC5A5Q92911 643 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 UNC45AQ9H3U1 944 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 ERAP1Q9NZ08 941 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZNF215Q9UL58 517 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 TRANK1O15050 2925 aa12.94□□□□□ -0.34
RAPGEF1-207ENST00000481260 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 TMEM150BA6NC51 233 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 BACH1O14867 736 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 CXCL10P02778 98 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 CYP3A7P24462 503 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 STAT5BP51692 787 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 USP11P51784 963 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 TMEM62Q0P6H9 643 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 LETM2Q2VYF4 491 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 ETNPPLQ8TBG4 499 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 DNAJB3Q8WWF6 145 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 FAM49AQ9H0Q0 323 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 NKX2-4Q9H2Z4 354 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
RAPGEF1-207ENST00000481260 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 MBLAC1A4D2B0 266 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 RSPH10B2B2RC85 870 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 BTBD18B2RXH4 712 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 EML1O00423 815 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZNF862O60290 1169 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 PSMD10O75832 226 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 RSPH10BP0C881 870 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 RFC2P35250 354 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 MGAT3Q09327 533 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 Q4G0T1 1027 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 KRT40Q6A162 431 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 PLPPR4Q7Z2D5 763 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 GABBR1Q9UBS5 961 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 TUBE1Q9UJT0 475 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
RAPGEF1-207ENST00000481260 NRCAMQ92823 1304 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 GBF1Q92538 1859 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 SIP14410 1827 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 LCHNA4D1U4 455 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 LRCH2Q5VUJ6 765 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 GALNT17Q6IS24 598 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
RAPGEF1-207ENST00000481260 POTEDQ86YR6 584 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms