RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 SMYD1Q8NB12 490 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 DDX54Q8TDD1 881 aaKnown RBP7.86□□□□□ -1.15
PKP4-211ENST00000481115 IFT43Q96FT9 208 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 ZNF274Q96GC6 653 aaPredicted RBP7.86□□□□□ -1.15
PKP4-211ENST00000481115 ATP6V1G3Q96LB4 118 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 NAP1L3Q99457 506 aaPredicted RBP7.86□□□□□ -1.15
PKP4-211ENST00000481115 SPON2Q9BUD6 331 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 MIS12Q9H081 205 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 NDST4Q9H3R1 872 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.86□□□□□ -1.15
PKP4-211ENST00000481115 TUBA8Q9NY65 449 aaPredicted RBP7.86□□□□□ -1.15
PKP4-211ENST00000481115 SNTG2Q9NY99 539 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 STRIP2Q9ULQ0 834 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 ZNF232Q9UNY5 417 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 SLC12A4Q9UP95 1085 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 SAMM50Q9Y512 469 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 RBM8AQ9Y5S9 174 aaKnown RBP7.86□□□□□ -1.15
PKP4-211ENST00000481115 BTAF1O14981 1849 aa7.86□□□□□ -1.15
PKP4-211ENST00000481115 PAPPAQ13219 1627 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 LAMA4Q16363 1823 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 SYNRGQ9UMZ2 1314 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 RGPD3A6NKT7 1758 aaPredicted RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 RGPD4Q7Z3J3 1758 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 LRRC10BA6NIK2 292 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 GNAT3A8MTJ3 354 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 CDK2AP1O14519 115 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 SPTLC2O15270 562 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 KLF4O43474 513 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 KRT86O43790 486 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 MFAP3LO75121 409 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 PEX14O75381 377 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 IFIT2P09913 472 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 GNAT1P11488 350 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 ZFXP17010 805 aaPredicted RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 HIRAP54198 1017 aaPredicted RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 AMPD3Q01432 767 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 MTX1Q13505 466 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 RTN1Q16799 776 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 PABPC1LQ4VXU2 614 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 FAM196AQ6ZSG2 479 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 IFT20Q8IY31 132 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 CCDC63Q8NA47 563 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 NOA1Q8NC60 698 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 RSPH1Q8WYR4 309 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 NCSTNQ92542 709 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 GFM2Q969S9 779 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 SYTL4Q96C24 671 aaPredicted RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 OPTNQ96CV9 577 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 DCAF5Q96JK2 942 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 IFT74Q96LB3 600 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 DEPDC7Q96QD5 511 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 USP28Q96RU2 1077 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 SMC6Q96SB8 1091 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 KCNMB3Q9NPA1 279 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 TYW1Q9NV66 732 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 UTP6Q9NYH9 597 aaKnown RBP7.85□□□□□ -1.15
PKP4-211ENST00000481115 CTTNBP2NLQ9P2B4 639 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 MAP4K5Q9Y4K4 846 aa7.85□□□□□ -1.15
PKP4-211ENST00000481115 MED23Q9ULK4 1368 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 KDM3BQ7LBC6 1761 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 ZMYM6O95789 1325 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 CCT8L1PA6NM43 557 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 ERVV-2B6SEH9 535 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 DNM1LO00429 736 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 BIRC5O15392 142 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 RNMTO43148 476 aaKnown RBP7.84□□□□□ -1.15
PKP4-211ENST00000481115 TMCC1O94876 653 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 MYL1P05976 194 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 USP17L7P0C7H9 530 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 CPA3P15088 417 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 TCP1P17987 556 aaKnown RBP7.84□□□□□ -1.15
PKP4-211ENST00000481115 ETFBP38117 255 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 CTCFP49711 727 aaPredicted RBP7.84□□□□□ -1.15
PKP4-211ENST00000481115 NDUFA8P51970 172 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 WNT7BP56706 349 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 MYO1EQ12965 1108 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 ITGB3BPQ13352 177 aaPredicted RBP7.84□□□□□ -1.15
PKP4-211ENST00000481115 PDCLQ13371 301 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 DGKZQ13574 1117 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 SLC39A14Q15043 492 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 STK38Q15208 465 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 ADCK5Q3MIX3 580 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 KBTBD12Q3ZCT8 623 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 TTMPQ5BVD1 217 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 ARSHQ5FYA8 562 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 FAM182BQ5T319 152 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 FAM173BQ6P4H8 233 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 ILDR2Q71H61 639 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 CYP2U1Q7Z449 544 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 MYLK4Q86YV6 388 aaPredicted RBP7.84□□□□□ -1.15
PKP4-211ENST00000481115 KIAA0825Q8IV33 1275 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 NECAB1Q8N987 351 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 STKLD1Q8NE28 680 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 IL17REQ8NFR9 667 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 KLHDC4Q8TBB5 520 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 RHPN1Q8TCX5 695 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 GPR152Q8TDT2 470 aa7.84□□□□□ -1.15
PKP4-211ENST00000481115 TEKT4Q8WW24 435 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms