RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 A0A087WUV0 522 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 DCTN3O75935 186 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 CCT5P48643 541 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 TFAMQ00059 246 aaKnown RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 SPARCL1Q14515 664 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 FAM160B2Q86V87 743 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 OTUB1Q96FW1 271 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 RPF1Q9H9Y2 349 aaKnown RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 STRIP2Q9ULQ0 834 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 RHOT2Q8IXI1 618 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 CCNYQ8ND76 341 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 MAML1Q92585 1016 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 DNAJC17Q9NVM6 304 aaKnown RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 ARL4CP56559 192 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 ANKARQ7Z5J8 1434 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 A0A0D9SFI3 127 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 SPAG7O75391 227 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 SEC24BO95487 1268 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 BRD2P25440 801 aaKnown RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 FLOT2Q14254 428 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 TBCCQ15814 346 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 DNAJC10Q8IXB1 793 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 PPP1R13BQ96KQ4 1090 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 KLC2Q9H0B6 622 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 NDUFA8P51970 172 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 SLC12A1Q13621 1099 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 SLC39A14Q15043 492 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 ATP8A1Q9Y2Q0 1164 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 SDK1Q7Z5N4 2213 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 MCF2P10911 925 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 CYP4F22Q6NT55 531 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 TRIM67Q6ZTA4 783 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.772e-31■□□□□ 9.6
VEGFA-212ENST00000480614 ATP7BP35670 1465 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 PPP1R12AO14974 1030 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 PIP4K2CQ8TBX8 421 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 TCP11Q8WWU5 503 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 CYP4A11Q02928 519 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 HP1BP3Q5SSJ5 553 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
VEGFA-212ENST00000480614 PYROXD1Q8WU10 500 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 M0R2C6 588 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 TRIM60Q495X7 471 aa10.25□□□□□ -0.77
VEGFA-212ENST00000480614 PTPRTO14522 1441 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 SYCE1LA8MT33 242 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 PPEF1O14829 653 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 NBPF9Q3BBW0 867 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 IREB2P48200 963 aaKnown RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ZBED6P86452 979 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ARL6IP4Q66PJ3 421 aaKnown RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 TTC13Q8NBP0 860 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 SNX19Q92543 992 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 CFAP36Q96G28 342 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 UIMC1Q96RL1 719 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ARHGEF9O43307 516 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 KRT4P19013 534 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 TCP11X2Q5H9J9 407 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 SH3GLB2Q9NR46 395 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 KIF17Q9P2E2 1029 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 EIF4A1P60842 406 aaKnown RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 EPB41L5Q9HCM4 733 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 COPRSQ9NQ92 184 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ITSN1Q15811 1721 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ARHGAP31Q2M1Z3 1444 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 JAK3P52333 1124 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ICE2Q659A1 982 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 RBM41Q96IZ5 413 aaKnown RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 BBOX1O75936 387 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 BASP1P80723 227 aaKnown RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 MYH3P11055 1940 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 KRT38O76015 456 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 TNFAIP2Q03169 654 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 FAM95CA0A1B0GW59 222 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 DR1Q01658 176 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 GCOM2Q9BZD3 368 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-212ENST00000480614 CCDC188H7C350 402 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 PSMA2P25787 234 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 PTK2BQ14289 1009 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 ANGPTL8Q6UXH0 198 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 MMS22LQ6ZRQ5 1243 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 KIRREL3Q8IZU9 778 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
VEGFA-212ENST00000480614 A0A1B0GW55 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 FGAP02671 866 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 NPR1P16066 1061 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 GANCQ8TET4 914 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 ING2Q9H160 280 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
VEGFA-212ENST00000480614 PRKG1Q13976 671 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms