RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 NPAS4Q8IUM7 802 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 USP26Q9BXU7 913 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 MAF1Q9H063 256 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
CCDC18-208ENST00000479653 BAHCC1Q9P281 2608 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 ARP10275 920 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 HOXB8P17481 243 aaPredicted RBP13□□□□□ -0.33
CCDC18-208ENST00000479653 CD52P31358 61 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 GATMP50440 423 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 UBE3AQ05086 875 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 UTP14CQ5TAP6 766 aaKnown RBP13□□□□□ -0.33
CCDC18-208ENST00000479653 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 TSHZ3Q63HK5 1081 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 CWF19L1Q69YN2 538 aaKnown RBP13□□□□□ -0.33
CCDC18-208ENST00000479653 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 RUFY4Q6ZNE9 571 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 THNSL1Q8IYQ7 743 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 DCLK2Q8N568 766 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 PANK1Q8TE04 598 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 LMBR1Q8WVP7 490 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
CCDC18-208ENST00000479653 LRRCC1Q9C099 1032 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 POMKQ9H5K3 350 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 BCAS3Q9H6U6 928 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 AAASQ9NRG9 546 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 MRPL11Q9Y3B7 192 aaKnown RBP13□□□□□ -0.33
CCDC18-208ENST00000479653 CEP250Q9BV73 2442 aa13□□□□□ -0.33
CCDC18-208ENST00000479653 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
CCDC18-208ENST00000479653 FGF18O76093 207 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 TGFB3P10600 412 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 TPRNQ4KMQ1 711 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
CCDC18-208ENST00000479653 PDE12Q6L8Q7 609 aaKnown RBP12.99□□□□□ -0.33
CCDC18-208ENST00000479653 TSHZ1Q6ZSZ6 1077 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
CCDC18-208ENST00000479653 TRIM50Q86XT4 487 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 LINC01599Q8WXQ3 324 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 RUBCNQ92622 972 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 NECTIN4Q96NY8 510 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 RTP3Q9BQQ7 232 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 PDCD2LQ9BRP1 358 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
CCDC18-208ENST00000479653 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
CCDC18-208ENST00000479653 NRCAMQ92823 1304 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 ORC4O43929 436 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 NEFLP07196 543 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 NPR3P17342 541 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 ADAM17P78536 824 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 MGAT3Q09327 533 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 KCNC3Q14003 757 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 TAF2Q6P1X5 1199 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 TDRD5Q8NAT2 981 aaKnown RBP12.98□□□□□ -0.33
CCDC18-208ENST00000479653 DNAJB3Q8WWF6 145 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
CCDC18-208ENST00000479653 GPATCH3Q96I76 525 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 CHAMP1Q96JM3 812 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 FTHL17Q9BXU8 183 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 ADAM7Q9H2U9 754 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 AGO3Q9H9G7 860 aaKnown RBP12.98□□□□□ -0.33
CCDC18-208ENST00000479653 ENTPD7Q9NQZ7 604 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 CDY2AQ9Y6F7 541 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 ATRXP46100 2492 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 SPTBN2O15020 2390 aa12.98□□□□□ -0.33
CCDC18-208ENST00000479653 SNHG28P0DPA3 235 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 SCG2P13521 617 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 SP4Q02446 784 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 ITIH3Q06033 890 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 QRICH1Q2TAL8 776 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 CYFIP1Q7L576 1253 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 SIX5Q8N196 739 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 TTC14Q96N46 770 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 TCP11L1Q9NUJ3 509 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
CCDC18-208ENST00000479653 PCDHB7Q9Y5E2 793 aa12.97□□□□□ -0.33
CCDC18-208ENST00000479653 TBKBP1A7MCY6 615 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 HIDE1A8MVS5 230 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 FSCN2O14926 492 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 RFX1P22670 979 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 MTHFRP42898 656 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 PGM5Q15124 567 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 ZDHHC14Q8IZN3 488 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 IL31RAQ8NI17 732 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 RASGRP4Q8TDF6 673 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 CASP10Q92851 521 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 GPR20Q99678 358 aa12.96□□□□□ -0.33
CCDC18-208ENST00000479653 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms