RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SEC63Q9UGP8 760 aaKnown RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 FEM1BQ9UK73 627 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 PRR12Q9ULL5 1215 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 KCNJ14Q9UNX9 436 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 KCNH4Q9UQ05 1017 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 USP20Q9Y2K6 914 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 SMCHD1A6NHR9 2005 aa7.64□□□□□ -1.19
USP48-208ENST00000479177 RBBP6Q7Z6E9 1792 aaKnown RBP7.64□□□□□ -1.19
USP48-208ENST00000479177 A0A0G2JLL6 359 aaPredicted RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 ESYT2A0FGR8 921 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 TGFBR3LH3BV60 316 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 TNFRSF10BO14763 440 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 XBP1P17861 261 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 IKQ13123 557 aaPredicted RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 MCTP1Q6DN14 999 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 BRAPQ7Z569 592 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 PRRT2Q7Z6L0 340 aaPredicted RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 DIS3L2Q8IYB7 885 aaKnown RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 DAGLBQ8NCG7 672 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 CCDC148Q8NFR7 591 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 CHURC1Q8WUH1 139 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 SLF1Q9BQI6 1058 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 TANGO6Q9C0B7 1094 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 RANBP17Q9H2T7 1088 aaKnown RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 RPAP3Q9H6T3 665 aaPredicted RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 VAT1LQ9HCJ6 419 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 FBXO28Q9NVF7 368 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 TMOD4Q9NZQ9 345 aa7.63□□□□□ -1.19
USP48-208ENST00000479177 COL11A1P12107 1806 aaPredicted RBP7.63□□□□□ -1.19
USP48-208ENST00000479177 CXCL11O14625 94 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 BAG4O95429 457 aaKnown RBP7.62□□□□□ -1.19
USP48-208ENST00000479177 EPXP11678 715 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 U2AF2P26368 475 aaKnown RBP eCLIP7.62□□□□□ -1.19
USP48-208ENST00000479177 CALML3P27482 149 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 KRT2P35908 639 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 IDH3AP50213 366 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 NAPAP54920 295 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 SNAP25P60880 206 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 MOGSQ13724 837 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 SAFBQ15424 915 aaKnown RBP eCLIP7.62□□□□□ -1.19
USP48-208ENST00000479177 C11orf91Q3C1V1 193 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 CST9Q5W186 159 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 C16orf46Q6P387 395 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 FCHSD1Q86WN1 690 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 NOSTRINQ8IVI9 506 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 ETFBKMTQ8IXQ9 262 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 C2orf69Q8N8R5 385 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 CCDC12Q8WUD4 166 aaPredicted RBP7.62□□□□□ -1.19
USP48-208ENST00000479177 OPTNQ96CV9 577 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 IFT43Q96FT9 208 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 WNK4Q96J92 1243 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 CHAMP1Q96JM3 812 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 GBP4Q96PP9 640 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 FOXP1Q9H334 677 aaPredicted RBP7.62□□□□□ -1.19
USP48-208ENST00000479177 ZSCAN16Q9H4T2 348 aaPredicted RBP7.62□□□□□ -1.19
USP48-208ENST00000479177 PPP1R9AQ9ULJ8 1098 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 ATP6V1DQ9Y5K8 247 aa7.62□□□□□ -1.19
USP48-208ENST00000479177 MYPNQ86TC9 1320 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 BTBD18B2RXH4 712 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 ADAMTS3O15072 1205 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 FLOT1O75955 427 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 MICAL2O94851 1124 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 ARAFP10398 606 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 TAL1P17542 331 aaPredicted RBP7.61□□□□□ -1.19
USP48-208ENST00000479177 ADCY7P51828 1080 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 NLRP5P59047 1200 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 DNM1Q05193 864 aaKnown RBP7.61□□□□□ -1.19
USP48-208ENST00000479177 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 LAMC2Q13753 1193 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 TREML2Q5T2D2 321 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 ZNF468Q5VIY5 522 aaPredicted RBP7.61□□□□□ -1.19
USP48-208ENST00000479177 IER5Q5VY09 327 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 GALNT17Q6IS24 598 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 PHLDB3Q6NSJ2 640 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 FAM173BQ6P4H8 233 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 CATSPERGQ6ZRH7 1159 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 PRPF38AQ8NAV1 312 aaKnown RBP7.61□□□□□ -1.19
USP48-208ENST00000479177 SMC1BQ8NDV3 1235 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 REPS2Q8NFH8 660 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 COA7Q96BR5 231 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 AMNQ9BXJ7 453 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 ZMYND12Q9H0C1 365 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 SLC38A10Q9HBR0 1119 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 BRMS1Q9HCU9 246 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 PCDHA4Q9UN74 947 aa7.61□□□□□ -1.19
USP48-208ENST00000479177 ZNF536O15090 1300 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 OPLAHO14841 1288 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 ICAM1P05362 532 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 MCM4P33991 863 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 HUNKP57058 714 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 KRT85P78386 507 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 SNAPC2Q13487 334 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 GNL2Q13823 731 aaKnown RBP7.6□□□□□ -1.19
USP48-208ENST00000479177 NFKBIBQ15653 356 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 NOM1Q5C9Z4 860 aaKnown RBP7.6□□□□□ -1.19
USP48-208ENST00000479177 EARS2Q5JPH6 523 aaKnown RBP7.6□□□□□ -1.19
USP48-208ENST00000479177 CCDC174Q6PII3 467 aa7.6□□□□□ -1.19
USP48-208ENST00000479177 GADL1Q6ZQY3 521 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms